Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181253g00013 ATGACTAAGCCAGAGTCACTTCTTTTCACTCTCTTGTTCACAATTTCATTGCTGATGATGCATGCTCATTCTTCTCAGAAACAGGTCTATATTGTGTATATGGGGGAGAAGAATAATAATAATTGGGATGAAATCTCCACACAATCATTGCATCATTCCATGCTACTAGAGGTTCATGAAAGCATTGATGAAGCAAAGGAGTCATTGGTTTACAGTTATGGAAGAAGCTTTAATGGGTTTGCAGCTATGCTATGTGAAGAAGAAGCTGCCATAATTTCTGATATGGAAGAGGTAGTGTCAGTTTTCCCAAACCTAGGATTGGATCTCCAAACAACAAGATCATGGGATTTCATGGGATTCACAGATGATTATGCATCCAATAAGCTTACACCTCCTTTTGATGGAACAAACATCATCATTGGAATGTTTGACACAGGAATCTGGCCTGAATCAGAAAGTTTTAATGATGAAGGATTAGGTCCACCACCTCAACACTGGAAAGGAAAGTGCCAAACAGAACATAATTTCACCTGCAATAATAAGATCATTGGAGCCCGGTATTATCAGAGCTTTGATCTTGAAGACCAATTTAGATCAGCAAGAGATGAATCCGGCCATGGAAGCCATGCTGCATCGGTTGCGGCCGGAAGGGAGGTTGTAGGAGCCAATTACTTTGGCCTAGCTAAGGGAACTGCAAAGGGTGGAGCACCTAATGCCAGAATTGCTGTTTACAAAGTGTGCTGGAACATGGCATGCTATGCTGCTGATATCTTAGCTGCTTTTGATGATGCAATTGCGGATGGAGTCGACATTATATCGGCCTCATTCGCAGGATACTTGCAGTCGAGATTCTTGTTCAATCCAGTAGCAATTGGATCCTTTCATGCTGTGAAGAATGGAATATTAACCATAGCAGCTGGTGGTAATCAAGGACCACAAAGAGGAGGTTTAGCTAATCACCCTCCTTGGATACTAACTGTTGCAGCTAGCACCATTGACAGAAAATTTGTGACACCTTTGGTTCTAGGAAATGGAGATGTAATAGCAGCAAATTCTATCAATACTTATAATGTTAAGAATATATCATATCCATTGCTTTGGGGAGGATATGCTACAAACTTTTCAGCCAATTATATTCCCAGAGAGTCAAGTCTATGCTTCCCTGGCTCCTTAAATTCAAAGATAGTTAAAGGAAAAATTGTCCTTTGTGAAAACAGCGAGGGTGGCGCCGGAGTCCAAATGGCAGCCGGGGCGGGTGTCATAGCCCCAATTAGACCACAACAGAACTTTGCTGAGAATTACCTCTTCCAAACAGCAAGTATCAGTAACAAGGAGTTCTCTCAAGTATTAAAATACATCAAATCCTCCAATAACCCAAAGGCAAACATAATGTTTAGTGAGACCATGGAGGACATGGATGCTCCTTATGTAGCTAGCTTTTCAAGTAGAGGCCCCAACATTTTCAATCATGACATTCTCAAGCCTGATCTTTGTGCACCTGGGGTGAATATTCTTGGAGCATGGTCTCCTGTTGCATCACCTTCCATGTTTAGTGGAACTGAGGATCTTAGGAGTGTTGAATACAACGTTGTCTCTGGAACTTCAGTGTCTTGCCCTCATGTTACAGGTGCTGCGGCTTATGTAAAGGCCACTCACCCAACCTGGTCCCCTGCAGCTATCAAGTCTGCACTCATGACCACAGCATATCCTATGGATCCAAAAATGCATGAGTATGAGAATGAATTTGCATATGGTTCTGGACATGTTAGACCAGTTTATGCAGTGAATCCTGGCCTAGTTTTCAATGCTACTAAGGAAGATTACAGTGATTTCTTCTGCAAGGAAGGTCCTAGAAGTGGTTGTAAAAGCACCAAACCATTGAAACCATGGGATCTAAACTACCCTTCACTCTCACTAGCAGTAAAGGATGGGAATCAGATCAAGGGCAATTTTGTCAGAGCAGTTACAAATGTTGGCACCCCAAAATCAACCTATAATGTTATCATTGATGTGCCACATATTCTCAAAGTCAAAGTGGAACCATCAACTCTTGCATTTTCTAAAGTTGGAGAAGAAAAGATCTTCTATGTTGAAGTCACAGGGCCAAAGATATCACAGATTCCAATAATCTCAGGTTCCATAACCTGGGTTCATGAGAATCATAGAGTCAGAATCCCAATTGTAGTTTACACTGTCCTTCCATGGGATTCAGAATTTCATCATTAA 2226 0.4155 MTKPESLLFTLLFTISLLMMHAHSSQKQVYIVYMGEKNNNNWDEISTQSLHHSMLLEVHESIDEAKESLVYSYGRSFNGFAAMLCEEEAAIISDMEEVVSVFPNLGLDLQTTRSWDFMGFTDDYASNKLTPPFDGTNIIIGMFDTGIWPESESFNDEGLGPPPQHWKGKCQTEHNFTCNNKIIGARYYQSFDLEDQFRSARDESGHGSHAASVAAGREVVGANYFGLAKGTAKGGAPNARIAVYKVCWNMACYAADILAAFDDAIADGVDIISASFAGYLQSRFLFNPVAIGSFHAVKNGILTIAAGGNQGPQRGGLANHPPWILTVAASTIDRKFVTPLVLGNGDVIAANSINTYNVKNISYPLLWGGYATNFSANYIPRESSLCFPGSLNSKIVKGKIVLCENSEGGAGVQMAAGAGVIAPIRPQQNFAENYLFQTASISNKEFSQVLKYIKSSNNPKANIMFSETMEDMDAPYVASFSSRGPNIFNHDILKPDLCAPGVNILGAWSPVASPSMFSGTEDLRSVEYNVVSGTSVSCPHVTGAAAYVKATHPTWSPAAIKSALMTTAYPMDPKMHEYENEFAYGSGHVRPVYAVNPGLVFNATKEDYSDFFCKEGPRSGCKSTKPLKPWDLNYPSLSLAVKDGNQIKGNFVRAVTNVGTPKSTYNVIIDVPHILKVKVEPSTLAFSKVGEEKIFYVEVTGPKISQIPIISGSITWVHENHRVRIPIVVYTVLPWDSEFHH 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181253g00013 741 Pfam Fibronectin type-III domain 631 729 IPR041469 -
Stsc181253g00013 741 FunFam Subtilisin-like protease SBT1.5 137 343 - -
Stsc181253g00013 741 Gene3D - 606 732 - -
Stsc181253g00013 741 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 729 IPR045051 -
Stsc181253g00013 741 ProSiteProfiles Serine proteases, subtilase domain profile. 114 595 - -
Stsc181253g00013 741 FunFam Subtilisin-like protease SBT5.3 19 110 - -
Stsc181253g00013 741 CDD Peptidases_S8_3 109 569 IPR034197 -
Stsc181253g00013 741 SUPERFAMILY Subtilisin-like 11 643 IPR036852 GO:0004252|GO:0006508
Stsc181253g00013 741 CDD PA_subtilisin_like 340 463 - -
Stsc181253g00013 741 Pfam Peptidase inhibitor I9 29 105 IPR010259 -
Stsc181253g00013 741 Gene3D Peptidase S8/S53 domain 137 605 IPR036852 GO:0004252|GO:0006508
Stsc181253g00013 741 Pfam Subtilase family 135 584 IPR000209 GO:0006508|GO:0008236
Stsc181253g00013 741 Gene3D - 333 470 - -
Stsc181253g00013 741 PRINTS Subtilisin serine protease family (S8) signature 202 215 IPR015500 -
Stsc181253g00013 741 PRINTS Subtilisin serine protease family (S8) signature 532 548 IPR015500 -
Stsc181253g00013 741 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Stsc181253g00013 741 ProSitePatterns Serine proteases, subtilase family, serine active site. 533 543 IPR023828 -
Stsc181253g00013 741 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 109 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181253g00013 Stsc-Chr181253 62325 66070 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181253g00013 51 734 Subtilisin-like Serine Gene Family AT5G59190 46.275 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181253g00013 - - lang:109355570 955.281