Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181252g00040 ATGATTACCATCATGTCCTCCTCATCGCAAGATTCACGTCAGATAGCACCTGGTTCATCGCTGTACCCAACTACTCAGCCCACTTCATGGCTTTCCCCTTCTGGATTCTTTGCATTTGGCTTTTACCATCAAGAGCATGGAGGTTTCGCCCTTGGTATTTGGTTGGTTGCCACAAACACAGTGGTATGGAGTGCAACATCAATTAGCAGTGATGATCCGCCACTCACCCCAACTGCAAAACTCGAACTAACAAAACAAGGTAAACTTGTTCTGCAAACACAAGAGAATGAGAATAACCATGTTGTTGTTGCTAATACCACTGAAACTGCTTACTCTGCCTCCATGCTTGATTCTGGAAACTTTGTTCTCTACAACCACAATTCCACCATCATATGGCAGAGTTTTGACCACCCAACCGACACAATCTTGGGTGGTCAGTCTCTACCCTGTGGAGCTCAACTTGTGTCTGCTTCTGGCTCCTCAGCAAGACCACGATTTGTTCTCGCCATGCAGTTTGATGGGAATCTTGTTCTGTATGCAGGAGACACCGCAAACACACCCAGCGATGCATATTGGTCATCTGAAACTCAGACTTACAACCCTTCCAGTATTCTTTACCTTGATGCCAACCATGGCTATCTGCTCATCAATGACAGCACTAGCTCCTCAATCATCAAGTCTCTTTATTCTGCTTCATCTTCGCCGACAAGAGGAACCATAATATATCGTGCTACGCTGGACACTGATGGATTCTTCCGCTTGTATGCGCATGATATCAGCAATACCAACCTCACCACTCTCCAGGGATGGCCAGAAGGCAACAATTCTTGTTTGGTAAAGGGTAACTGTGGCCACAACAGCATCTGCCAGTTCGATGGCAAGAACCCACACTGTACATGTCTTCCTGGATTCGACTTTGTTGATCCTAACCAACACAATATTGGTTGCAAAAGAAACATTTCCCAACCAAACTGCGCTGGCCAAGATTACATAGCGTTCTATAACATGGTTACTCTGCCCAATTTGGTGTGGGCCGCTCGTCCTTATTACGCTACGCTCAGGGGTTTGCAGGAACACGAATGCTCCATCTCTTGTTTGCTGGATTGCAATTGCTGGGCTGCTCTCTATACCAACGGGCTATGCATCAAGCAAGAGCCCCCTCTCAGGTATGCTAGATTCACGGTGCAAGACGAACAACCCTCCTCTGTGTTCTTGAAGGTCGGAAACGTAACTCTCAATCCTCCTATGTATGTGCCTGATGGTGAACAAGTCCGACCACCTCAAAAGAGTGGCACTAGTAACAAAGCAATTCTGCACATTATTCTTATTACATCCATTTTCACCCTTATTTTGTGCTTAACTACTGGAATGTCTTGCCATTTGATATACAAGATTCGGGTTTTGAGGTACAAGAGGCTCTTGGAGATTGGGGACTTGAGACTCAATGAGGAAGTGGCTTTGAGGAGATTTTCCTACAGCGAGCTCAAGAGAGCAACCGATGGTTTCAAGCAAGAGTTGGGAAAGGGATCTTTTGGAGCAGTTTATAAAGGGGTTTTGTACAAAGGCAAAAGTAGGAGATTGATCGCGGTGAAGAGGCTTGAGAAGTTGGTTGAAGAAGGAGAAAGAGAGTTCCAGGCAGAGGTGAGAGCCATTGGAAAAACACACCACAGGAACCTTGTTCGCTTGCTTGGCTTTTGTGCTGAGGGTTCCAAAAGGCTTCTGGTCTATGAATACATGAGCAATGGTTCTCTTGGGAAGCTTCTCTTTGGCGATGAAAGGCTTCCGAATTGGGATGAGAGAGTGAGAATAGCACTGGATATTGCAAGAGGGATCCTCTATCTGCATGAAGAATGCGAAGCTCCCATCATTCACTGTGACATAAAGCCTCAAAATATCTTGATGGATGAGTTCTGGACTGCAAAAATATCTGATTTCGGGCTAGCGAAGCTGCTTATGCCGGATCAAACAAGAACCTTCACAGGAGTTAGAGGGACAAGAGGGTACTTGGCCCCTGAATGGAACAAGAACACACCAATAACAGTGAAGGCTGATATCTACAGCTATGGGATAGTGCTTCTTGAAACAGTGTGTTGCAGGAGAAGCTTAGATGTTAATGTGTTGGAGCCAAATGAGATTCTTCTGTCTGGTTGGGCATACAAGTGCTTTGTTGCTGGAGAGCTGCATAAGCTAGTTCATTGGGAAGAAGTAGATAAGAATGCTGTGGAAAATGTGGTGAAGGTGGCACTGTGGTGTATCCAAGATGAACCTATTCTCAGGCCTTCAATGAAGAGTGTGGTGCTCATGCTTGAAGGGGTTACTGATGTGGCAATTCCTCCTTGCCCCACTTCTGATTCCACGTGA 2361 0.4579 MITIMSSSSQDSRQIAPGSSLYPTTQPTSWLSPSGFFAFGFYHQEHGGFALGIWLVATNTVVWSATSISSDDPPLTPTAKLELTKQGKLVLQTQENENNHVVVANTTETAYSASMLDSGNFVLYNHNSTIIWQSFDHPTDTILGGQSLPCGAQLVSASGSSARPRFVLAMQFDGNLVLYAGDTANTPSDAYWSSETQTYNPSSILYLDANHGYLLINDSTSSSIIKSLYSASSSPTRGTIIYRATLDTDGFFRLYAHDISNTNLTTLQGWPEGNNSCLVKGNCGHNSICQFDGKNPHCTCLPGFDFVDPNQHNIGCKRNISQPNCAGQDYIAFYNMVTLPNLVWAARPYYATLRGLQEHECSISCLLDCNCWAALYTNGLCIKQEPPLRYARFTVQDEQPSSVFLKVGNVTLNPPMYVPDGEQVRPPQKSGTSNKAILHIILITSIFTLILCLTTGMSCHLIYKIRVLRYKRLLEIGDLRLNEEVALRRFSYSELKRATDGFKQELGKGSFGAVYKGVLYKGKSRRLIAVKRLEKLVEEGEREFQAEVRAIGKTHHRNLVRLLGFCAEGSKRLLVYEYMSNGSLGKLLFGDERLPNWDERVRIALDIARGILYLHEECEAPIIHCDIKPQNILMDEFWTAKISDFGLAKLLMPDQTRTFTGVRGTRGYLAPEWNKNTPITVKADIYSYGIVLLETVCCRRSLDVNVLEPNEILLSGWAYKCFVAGELHKLVHWEEVDKNAVENVVKVALWCIQDEPILRPSMKSVVLMLEGVTDVAIPPCPTSDST 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181252g00040 786 MobiDBLite consensus disorder prediction 1 20 - -
Stsc181252g00040 786 ProSitePatterns Protein kinases ATP-binding region signature. 506 531 IPR017441 GO:0005524
Stsc181252g00040 786 CDD STKc_IRAK 506 771 - -
Stsc181252g00040 786 Gene3D - 8 137 IPR036426 -
Stsc181252g00040 786 Pfam D-mannose binding lectin 60 148 IPR001480 -
Stsc181252g00040 786 Coils Coil 530 550 - -
Stsc181252g00040 786 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 579 777 - -
Stsc181252g00040 786 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 25 781 - -
Stsc181252g00040 786 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Stsc181252g00040 786 ProSiteProfiles Bulb-type lectin domain profile. 6 136 IPR001480 -
Stsc181252g00040 786 SMART blect_4 139 264 IPR001480 -
Stsc181252g00040 786 SMART blect_4 21 138 IPR001480 -
Stsc181252g00040 786 SUPERFAMILY Protein kinase-like (PK-like) 485 770 IPR011009 -
Stsc181252g00040 786 SUPERFAMILY alpha-D-mannose-specific plant lectins 156 256 IPR036426 -
Stsc181252g00040 786 ProSiteProfiles EGF-like domain profile. 273 310 IPR000742 -
Stsc181252g00040 786 ProSiteProfiles Protein kinase domain profile. 500 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181252g00040 786 CDD EGF 277 304 - -
Stsc181252g00040 786 Gene3D - 138 277 - -
Stsc181252g00040 786 CDD B_lectin 31 138 IPR001480 -
Stsc181252g00040 786 Gene3D Transferase(Phosphotransferase) domain 1 579 777 - -
Stsc181252g00040 786 Gene3D Phosphorylase Kinase; domain 1 478 578 - -
Stsc181252g00040 786 SMART serkin_6 500 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181252g00040 786 PIRSF SRK 1 786 IPR024171 GO:0004674
Stsc181252g00040 786 ProSiteProfiles Bulb-type lectin domain profile. 139 267 IPR001480 -
Stsc181252g00040 786 Pfam S-locus glycoprotein domain 234 305 IPR000858 GO:0048544
Stsc181252g00040 786 FunFam S-receptor-like serine/threonine-protein kinase 475 578 - -
Stsc181252g00040 786 Pfam Protein kinase domain 503 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181252g00040 786 SUPERFAMILY alpha-D-mannose-specific plant lectins 51 196 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181252g00040 Stsc-Chr181252 222345 225675 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181252g00040 451 779 Receptor kinase-like Gene Family AT5G20050 39.118 1.43e-67 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Stsc181252g00040 Pkinase 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181252g00040 - - adu:107470047 1252.27