Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181252g00017 ATGGAAGTCTTACTCAGGAGGTTCCTCAAGGCCACGCCTATCGCATTCGCCAATGCTTTCAACGCCCAAGCCAAGTCCTCTTCCTCCTCCACTTACTCTTCCGCCAAATTCCGCCTACCATATGCTGCTGTCGCCGCCGGCATCTCCGGCGGTCTCTCCTGCTTCTACTTCATCTCCTCTCCTAACATCGCTCATTCAGAACAGGCTGAAGAAGGGGGAAGCAGAAATATTGCTCTCAATCCAAATAAATGGGTTGAATTTAAGTTGCAGGATACTGCCATAGTCAGTCACAATACCCAGCTGTTCAGGTTTTCGTTTGATCCCTCTAAAAAGTTGGGCTTGGATATTGCTTCCTGCATTCTTACAAGGGCTCCATTGGGACAGGATGCTGAAGGGAAACCGAAATATGTGATACGTCCGTATACTCCTATATCGGATCCAGAAGCCAAGGGATATTTTGATTTGTTAATCAAGGTGTATCCTGAAGGAAAAATGAGTCAGCATTTTGCAAGCTTGAAACCGGGTGATGTTGTTGAAGTTAAAGGGCCCGTTGAAAAACTCAGATATACCCCTAATATGAAGAAGCATATTGGCATGATTGCTGGTGGCTCAGGAATTACTCCAATGCTTCAGATAATTGAGGCGATATTGAAGAATCCTGATGACAAAACTAAGATATCATTGCTTTATGCAAACGTGTCCCCAGATGACATACTGCTTAAACAAAAGCTTGATGTTCTAGCCGCAACCCACCCTAACTTAAAGATATTCTACACAGTTGATAATCCAACAAAAAATTGGAGGGGAGGTGCAGGTATAATATCAGGGGATATGGTTGTGAAAGGTTTACCGGAACCCAGTGATGATACTCTAATACTTGTATGTGGTCCCCCTGGGATGATGAAACACGTATCTGGTGAGAAGGCTCCAGATTGGACACAAGGAGAGGTTTCTGGTTTGCTCAAAGAAGCTGGGTACACTGAACAAATGGTTTACAAATTTTGA 1005 0.4418 MEVLLRRFLKATPIAFANAFNAQAKSSSSSTYSSAKFRLPYAAVAAGISGGLSCFYFISSPNIAHSEQAEEGGSRNIALNPNKWVEFKLQDTAIVSHNTQLFRFSFDPSKKLGLDIASCILTRAPLGQDAEGKPKYVIRPYTPISDPEAKGYFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPVEKLRYTPNMKKHIGMIAGGSGITPMLQIIEAILKNPDDKTKISLLYANVSPDDILLKQKLDVLAATHPNLKIFYTVDNPTKNWRGGAGIISGDMVVKGLPEPSDDTLILVCGPPGMMKHVSGEKAPDWTQGEVSGLLKEAGYTEQMVYKF 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181252g00017 334 PANTHER NADH-CYTOCHROME B5 REDUCTASE 50 334 IPR001834 GO:0016491
Stsc181252g00017 334 FunFam NADH-cytochrome b5 reductase 181 334 - -
Stsc181252g00017 334 PRINTS Cytochrome B5 reductase signature 236 247 - -
Stsc181252g00017 334 PRINTS Cytochrome B5 reductase signature 291 299 - -
Stsc181252g00017 334 PRINTS Cytochrome B5 reductase signature 198 217 - -
Stsc181252g00017 334 PRINTS Cytochrome B5 reductase signature 139 146 - -
Stsc181252g00017 334 PRINTS Cytochrome B5 reductase signature 175 189 - -
Stsc181252g00017 334 Gene3D - 181 334 IPR039261 -
Stsc181252g00017 334 SUPERFAMILY Riboflavin synthase domain-like 77 192 IPR017938 -
Stsc181252g00017 334 Pfam Oxidoreductase FAD-binding domain 87 189 IPR008333 -
Stsc181252g00017 334 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 176 332 IPR039261 -
Stsc181252g00017 334 Gene3D Translation factors 77 180 - -
Stsc181252g00017 334 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 291 299 IPR001709 GO:0016491
Stsc181252g00017 334 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 236 247 IPR001709 GO:0016491
Stsc181252g00017 334 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 139 146 IPR001709 GO:0016491
Stsc181252g00017 334 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 198 217 IPR001709 GO:0016491
Stsc181252g00017 334 FunFam NADH-cytochrome b5 reductase 77 180 - -
Stsc181252g00017 334 CDD cyt_b5_reduct_like 87 334 - -
Stsc181252g00017 334 Pfam Oxidoreductase NAD-binding domain 199 305 IPR001433 GO:0016491
Stsc181252g00017 334 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 82 190 IPR017927 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181252g00017 Stsc-Chr181252 108223 112984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181252g00017 75 334 NADPH P450 reductases AT5G17770 41.985 1.57e-64 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181252g00017 K00326 - gmx:100781191 538.495