Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181252g00012 ATGCAGTTTTTTGTCCTTGTGTTAAACGACAGCCAAATACCTGCTGATTTCTTTAGCCTTCCCTCTTTGCAAGATGTGCTTGAAAATAATCCAATTTGTTATGAAATTGAAACAACCAAAACTTTCTGCAAACCACAACAGATCTTGGATGGAAAGCCACAAACGTACAAAACAAGTGTCCTCCAGCTTCTAGTTGCAGCTCTGATAAGAGTCTCAGTCCTATGTGTCACTGTGCCTATCCATACACTGGTACTTGCTAATAGACCACATGATTTTTCCCTCGACAACAAACTCGCCAACGGCGTTGGATCTGGGGGTTATGGAAAGGTTTATAAGGGAACTCTTCCCTCTGGACAACTGATAGCCATAAAAAGAGCTCAAAAGGAATCGAAGCAGGGCGGGTTAGAATTCAAAGCCGAGATTGAACTCCTTTCAAGGGTTTACCACAAGAATGTGGAAAATCAGGAATTAGATTTGGGTGGCATAGAAGGATAA 495 0.4182 MQFFVLVLNDSQIPADFFSLPSLQDVLENNPICYEIETTKTFCKPQQILDGKPQTYKTSVLQLLVAALIRVSVLCVTVPIHTLVLANRPHDFSLDNKLANGVGSGGYGKVYKGTLPSGQLIAIKRAQKESKQGGLEFKAEIELLSRVYHKNVENQELDLGGIEG 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181252g00012 164 Gene3D Phosphorylase Kinase; domain 1 81 154 - -
Stsc181252g00012 164 SUPERFAMILY Protein kinase-like (PK-like) 99 152 IPR011009 -
Stsc181252g00012 164 ProSitePatterns Protein kinases ATP-binding region signature. 102 124 IPR017441 GO:0005524
Stsc181252g00012 164 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 85 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181252g00012 Stsc-Chr181252 82142 83936 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181252g00012 90 152 Receptor kinase-like Gene Family AT1G79620 63.492 5.02e-19 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Stsc181252g00012 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181252g00012 - - aip:107638778 100.523