Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181251g00032 ATGCTGATGGTGGCGATGCACGACAACGATACCTGCGCCACCGACACCGGATTGCACCACCACGCTCCTCCGCCCACGCTCTCCACTGCCCCCGCTCCATCCTCTCCGGCGCACACTCGCCAGCAGCGCCAAAAGCTCCAAGTCTACAATGAAGTCCTTCGCCGCCTCAAAGATTCCGCCGTCGCCGAAGCTTTTCAGCCTGGCTTCGACGATCAGCTCTGGAACCACTTCAACCGCCTCCCCGCACGGTACGCGCTGGATGTGAATGTTGAAAGAGCCGCAGATGTTCTTATGCACAAGAGATTGCTACATTTGGCTCATGATCCTGTTAATAGGCCTGCAATTGAAGTTCGCTTAGTACAGGTTCCTCCTGTAACTGATGGAAACTCAGCTTACTCTGTCCAGTCAGATGCTATTGAGAATGAATCAGATCAAAGCTCCTCAAAGTACTCTAGCAGAAAGAGGCCCATGCATGAAATCACCTTCTCAACTGATGACAAGCCAAAGCTTCTCAGTCAGTTAACTGCTTTGCTTGCTGAGATTGGGCTGAACATCCAAGAGGCTCATGCCTTTTCCACAACTGATGGCTACTCGTTAGATGTGTTTGTTGTTGAAGGATGGCCCTATGATGAAACAGAGAAGCTTAAAACAGCTTTGGAAAAAGAGGTCATCAAGATTGAGAGGAGGGCAATGTCCAGTCAGCAATCGGTATCTTCTGTTGGCGAACATGAAGAAGGAATGATGAAAAATGAAATTGATCAGTTGAATATACCTAATGATGGGACAGATGTTTGGGAGATAGATCCTAAGCATTTGAAAATTGGAACTCAAATTGCATCTGGGTCATATGGTGAACTATTTAAAGGTATATATTGTAGCCAGGAAGTGGCCATTAAAATTCTCAAGCCTGAGCATGTAAATTCAGATTTGCAGAGAGAATTCGTGCAAGAAGTGTACATCATGAGAAAGGTTCGGCACAAAAATGTTGTACAATTTATAGGAGCTTGTACCAAGCCCCCACACTTATGCATAGTTACAGAGTTTATGTCTGGTGGTAGTGTATACGACTACTTACATAAGCGGAAGGGTAGTTTTAAATTTCCTACCTTGCTCAAAGTTGCAATAGATGTTGCTAAAGGAATGAACTACTTGCATCAACATGACATAATCCATAGAGACTTGAAAGCTGCTAATCTTTTGATGGATGAAAATGGTGTTGTAAAAGTTGCTGATTTTGGGGTTGCTAGAGTTAAAGCACAATCAGGAGTTATGACAGCAGAAACTGGAACTTATCGGTGGATGGCTCCAGAGGTTATAGAACACAAGCCGTACGATCACAAGGCTGATGTATTTAGTTTTGGAATTGTTTTATGGGAGTTGCTCACTGGAAAGCTCCCCTACGAATATTTGACCCCTCTACAAGCAGCCATAGGAGTGGTTCAAAAGGGTTTACGACCTACCATTCCCAAGAACACTCATCCGAAGTTTGTTGAGCTTCTTGAGAGGTCTTGGCAGCAGGATCCTACATTGAGACCCGATTTTGCAGAAATAATCGAGATCTTGCAGCAGTTAGCTAAGGAGGTTGGGGATGAAGGAGAGGAGCGACGCAAGGATAAAACTGGAGGATTTCTTTCTGTTCTCAGAAGAGGTCATCACTAA 1659 0.4491 MLMVAMHDNDTCATDTGLHHHAPPPTLSTAPAPSSPAHTRQQRQKLQVYNEVLRRLKDSAVAEAFQPGFDDQLWNHFNRLPARYALDVNVERAADVLMHKRLLHLAHDPVNRPAIEVRLVQVPPVTDGNSAYSVQSDAIENESDQSSSKYSSRKRPMHEITFSTDDKPKLLSQLTALLAEIGLNIQEAHAFSTTDGYSLDVFVVEGWPYDETEKLKTALEKEVIKIERRAMSSQQSVSSVGEHEEGMMKNEIDQLNIPNDGTDVWEIDPKHLKIGTQIASGSYGELFKGIYCSQEVAIKILKPEHVNSDLQREFVQEVYIMRKVRHKNVVQFIGACTKPPHLCIVTEFMSGGSVYDYLHKRKGSFKFPTLLKVAIDVAKGMNYLHQHDIIHRDLKAANLLMDENGVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAIGVVQKGLRPTIPKNTHPKFVELLERSWQQDPTLRPDFAEIIEILQQLAKEVGDEGEERRKDKTGGFLSVLRRGHH 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181251g00032 552 MobiDBLite consensus disorder prediction 130 156 - -
Stsc181251g00032 552 MobiDBLite consensus disorder prediction 130 146 - -
Stsc181251g00032 552 Gene3D Transferase(Phosphotransferase) domain 1 351 541 - -
Stsc181251g00032 552 ProSiteProfiles ACT domain profile. 159 231 IPR002912 -
Stsc181251g00032 552 CDD ACT_TyrKc 157 223 - -
Stsc181251g00032 552 Gene3D Phosphorylase Kinase; domain 1 262 350 - -
Stsc181251g00032 552 ProSiteProfiles Protein kinase domain profile. 272 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181251g00032 552 Pfam Protein tyrosine and serine/threonine kinase 272 521 IPR001245 GO:0004672|GO:0006468
Stsc181251g00032 552 FunFam serine/threonine-protein kinase HT1 351 541 - -
Stsc181251g00032 552 PRINTS Tyrosine kinase catalytic domain signature 346 359 IPR001245 GO:0004672|GO:0006468
Stsc181251g00032 552 PRINTS Tyrosine kinase catalytic domain signature 492 514 IPR001245 GO:0004672|GO:0006468
Stsc181251g00032 552 PRINTS Tyrosine kinase catalytic domain signature 429 439 IPR001245 GO:0004672|GO:0006468
Stsc181251g00032 552 PRINTS Tyrosine kinase catalytic domain signature 383 401 IPR001245 GO:0004672|GO:0006468
Stsc181251g00032 552 PRINTS Tyrosine kinase catalytic domain signature 448 470 IPR001245 GO:0004672|GO:0006468
Stsc181251g00032 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 389 401 IPR008271 GO:0004672|GO:0006468
Stsc181251g00032 552 SUPERFAMILY Protein kinase-like (PK-like) 257 521 IPR011009 -
Stsc181251g00032 552 SMART serkin_6 272 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181251g00032 552 MobiDBLite consensus disorder prediction 13 42 - -
Stsc181251g00032 552 CDD STKc_MAP3K-like 278 521 - -
Stsc181251g00032 552 Gene3D - 157 229 - -
Stsc181251g00032 552 FunFam Serine/threonine-protein kinase isoform 1 262 350 - -
Stsc181251g00032 552 SUPERFAMILY ACT-like 157 221 IPR045865 -
Stsc181251g00032 552 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 112 528 - -
Stsc181251g00032 552 Coils Coil 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181251g00032 Stsc-Chr181251 172922 179871 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181251g00032 40 551 MAP Kinase Kinase Kinase AT4G35780 65.392 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Stsc181251g00032 PK_Tyr_Ser-Thr 1.7e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181251g00032 - - adu:107467507 976.467