Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181251g00026 ATGTCATATCATATCTGTCGCTTCTTTTCTGCTGATGCTTCTAGCAAGTTAAGAGCCACTTGTGAAATGGGTAAGGTGTTAATGGTTCTAACAAATGCACTGGGTTTGTTGAAGCCAGTTATTATCTTGATTATTGTTAACTTAGCTATGGCTGTTGTCAATTTACTTATGAAGAAGGTTCTTAATGGAGGAATGGACAACATGATCATTGTAACATATCGACAAGTAGTTTCATTTACCTTCATGGCACCTATTGCTTGCTTGTATGAAAGGAAACACAAATTGGAGACTCACATAATATGTCTCCTTTTTCTCAGTTCTCTTGTCGGAGTAACACTCACCCAATACATATTTCTTCTTGGCCTTGAATATACGTCTACCACGTTTGCATGTGCATTCCTCAATGCAGTGCCAGTATTCACCTTCATCGTGGCACTGCCATTTGGCACAGCTATTTTGTCACTTTTTTCTGCCATTCAATCAGCAATATTAACATTGATCATCAAGGGAAAAAATGCCTCTTGGATTCTCAAAGGAAAGCTTGAAATAATGAGTGTTATATATGCTGGGTTGGTGGGATCAGGCTTGTGCTATGTAGCAATGTCATGGTGCGTCAAACAAAGGGGTCCAGTTTTTACTTCAGCATTTACCCCCCTTGTACAAATATTTGTGGCGGTGCTTGGTGTCTCTATATTAAAGGAAGAAATTTACCTAGGAAGTGTTGCAGGATCAGCCTTGGTTATTACTGGCATGTATATTCTTCTGTGGGGGAAAAGTCACGAGAGTGCACAATGTGTCAAGGTTACACAAGCAAGCCAACAAGATGTAGAATTGCAATAG 840 0.3952 MSYHICRFFSADASSKLRATCEMGKVLMVLTNALGLLKPVIILIIVNLAMAVVNLLMKKVLNGGMDNMIIVTYRQVVSFTFMAPIACLYERKHKLETHIICLLFLSSLVGVTLTQYIFLLGLEYTSTTFACAFLNAVPVFTFIVALPFGTAILSLFSAIQSAILTLIIKGKNASWILKGKLEIMSVIYAGLVGSGLCYVAMSWCVKQRGPVFTSAFTPLVQIFVAVLGVSILKEEIYLGSVAGSALVITGMYILLWGKSHESAQCVKVTQASQQDVELQ 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181251g00026 279 Pfam EamA-like transporter family 38 146 IPR000620 GO:0016020
Stsc181251g00026 279 Pfam EamA-like transporter family 150 255 IPR000620 GO:0016020
Stsc181251g00026 279 SUPERFAMILY Multidrug resistance efflux transporter EmrE 180 260 - -
Stsc181251g00026 279 PANTHER WAT1-RELATED PROTEIN 39 146 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181251g00026 Stsc-Chr181251 127874 130225 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181251g00026 150 258 Nodulin-like Gene Family AT4G01440 49.541 2.70e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181251g00026 - - vvo:131649186 206.838