Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181251g00015 ATGTCTAACACCGACGGAAACTCTAACGCCGTTACCAACATTGACACACACCGTCACCACTCACAGTCACAGCAGCCACCAACTAACGGCGCCCTCGTCGTCAAAAAGCCCCCTTCCAAAGACCGCCACAGCAAGGTCGACGGACGCGGCCGCCGTATTCGGATGCCTATCATCTGCGCTGCCCGCGTCTTCCAGCTCACCCGCGAGCTCGGCCACAAGTCCGACGGCCAAACCATCGAGTGGCTACTCCGCCAGGCCGAGCCCTCCATCATCGCCGCCACCGGAACTGGAACTACTCCCGCCAGCTTCTCCTCCGTTTCCGTCTCCGTACGCGGCGGCGCTGGCTCTCTCTCTTCTCCTTCTTCAACCTCCGCAGCGTCTTCGCTCGACCACAAGCCCTTGCTCGCTCCCACGCCCTTCATACTCGGCAAACGCATACGCACCGACGACGACGCTTCCGCCAAGGACGACGGCGTCTCCGTGGGACCCGCCGTGGGGTCCTTAGTGGGCCCTGGAGGTCCTGCTGGGCTCTGGGCCCTCCCGGCCAGGCCCGATTTCGGTCAAATTTGGAGTTTCGCTGCAGCTGCTCCTCCGCCGGAGATGGTTGTGCAGCCGGCGGCGGTGTCGGTGTCTCAGCAGCAGCAAGCTTCTTTGTTCGTTCACCATCAGCATCAGCAGCAGCAACAAGCCATGGGAGAAGCTTCGGCGGCGAGGCTGGGAAATTACCTTCCTGGACATCTGAATTTGCTGGCTTCTTTGTCGGGAGGGCCCGGAAATTCCGGCCGGAGAGATGATGAGCCTCGCTGA 807 0.6196 MSNTDGNSNAVTNIDTHRHHSQSQQPPTNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSVSVRGGAGSLSSPSSTSAASSLDHKPLLAPTPFILGKRIRTDDDASAKDDGVSVGPAVGSLVGPGGPAGLWALPARPDFGQIWSFAAAAPPPEMVVQPAAVSVSQQQQASLFVHHQHQQQQQAMGEASAARLGNYLPGHLNLLASLSGGPGNSGRRDDEPR 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181251g00015 268 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 239 IPR005333 GO:0003700
Stsc181251g00015 268 MobiDBLite consensus disorder prediction 36 51 - -
Stsc181251g00015 268 ProSiteProfiles TCP domain profile. 39 93 IPR017887 -
Stsc181251g00015 268 MobiDBLite consensus disorder prediction 110 130 - -
Stsc181251g00015 268 MobiDBLite consensus disorder prediction 1 30 - -
Stsc181251g00015 268 MobiDBLite consensus disorder prediction 1 51 - -
Stsc181251g00015 268 MobiDBLite consensus disorder prediction 110 129 - -
Stsc181251g00015 268 Pfam TCP family transcription factor 39 143 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181251g00015 Stsc-Chr181251 71483 72289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181251g00015 24 268 TCP Transcription Factor Family AT5G23280 66.129 1.21e-95 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc181251g00015 TCP 1.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181251g00015 K16221 - qsa:O6P43_020036 363.999