Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181251g00010 ATGTCTAAGACATCCAGTGTCCCGCCTGCCTTCCAATCTATCAAGTCATTGCCTCCTAACTTCAAGGTTGCCAATAATCTGAATGGTGGTCTTTCAAGCAAGCATGGCGATGTTAGATTGAAGAGCGGTGATCCAATTCGATCAAGTAGTCCTGCAAATGGTGCACTAGTGGTGGAGGTTTCTAAGGAAGTGCACGACCGTGCTGGCAACATGGATGTTTTCGATGAGGATTCGCCTTATAGTGGACAGGTTAGGTTGTTACAAGAAGAAGACAGGCCATCAAATGGTGGCGAAGACTCGGAATCTGTTCCTTTGCCCCTCCCGTCAAATTCTGCATCCTCTAGAGAAAGCAGGTGGAGTGATACAACTCCTTATGCTTCCAAGAAGAAGGTTCAGTGTTGGCTTCAACTTTCAAATGGGAATTGGGAGCTGGTGAAGATAATAACATCTTCTGGATCTGAGTCCGTTGTTTCACTGCCTGACGGGAAAGTTTTAAAGGTGCACGATGAAAGCTTAGTATCAGCAAATCCTGATATTCTTGATGGAGTGGATGACCTCATGCAACTTAGTTATTTAAACGAACCTTCAGTCTTATACAACTTACAATATAGATACAACCAGAATATGATCTATACAAAAGCAGGGCCTGTTTTGGTTGCCATAAATCCCTTCAAGAAAGTTCCTCTGTATGGTAATGATTATATTGAAGCCTACAAGCGTAAATCAATTGAAAGCCCTCATGTTTATGCCATTACTGACACTGCCATCCGAGAAATGATACGGGATGAAGTAAATCAGTCTATAATTATAAGTGGTGAGAGTGGAGCAGGGAAGACTGAGACAGCAAAGATAGCAATGCAATACTTGGCTGCCCTTGGTGGTGGAAGTGGAATAGAGTATGAGATACTGAAGACTAATCCAATACTAGAAGCCTTTGGTAATGGAAAAACACTGAGAAATGACAACTCAAGTCGTTTTGGGAAGCTCATTGAAATTCACTTCAGTGAAACTGGAAAAATATGTGGTGCTAATATCCAAACATTTCTTCTGGAAAAGTCTAGAGTTGTCCAATGCAATGAAGGGGAAAGATCCTATCATATATTTTATCAGCTATGTGCTGGGGCGCCACCATCTCTAAGGGATAAGCTAAATCTAAGAAGTGCTGAAGACTATAAATATCTTAGGCAGAGCAATTGTTACTCAATTGTTGGTGTTAATGATGCGGAAGAATTTCGCACAGTCATGGAAGCACTCGAGGTTGTCCATATTAGCAAAGAAGACCAGGAGAGTGTGTTTGCAATGCTTGCTGCGGTATTATGGTTAGGAAATGTATCATTTACAGTGATTGATAATGAAAATCATGTTCAAGCTGTTGAAGACGAGGGACTGTTGAGCGTTGCCAAGTTGATTGGCTGTGACATTGAAGATCTCAAGTTGACATTAACAACTCGCAAAATGAAAGTTGGCAACGATAATATTGTCCAAAAGTTGAAGCTTTCGCAGGCTATTGATGCAAGAGATGCTTTGGCAAAGTCAATATATTCCTGTTTGTTTGATTGGCTAGTTGAACAAATAAACAAATCACTTGCTGTTGGCAAAAGACGCACAGGCAGATCAATCAGTATCCTAGATATCTATGGCTTTGAATCATTCAACAGGAACAGTTTTGAGCAGTTCTGCATAAATTATGCTAATGAGAGATTGCAGCAGCACTTCAATCGTCATTTGTTTAAGTTAGAACAAGAGGAATATATACAAGATGGGATTGATTGGGCTAAAGTTGAATTTGAAGATAACCAAGATTGCCTTAATCTTTTTGAAAAGAAACCATTGGGCTTACTATCCCTGTTGGATGAAGAGTCCACATTCCCAAATGGCACAGATTTAACATTTGCCAACAAGCTTAAGCAACATTTGAATTCTAATTCTTGCTTCAAAGGAGAACGAGACAAAGCCTTTACTGTTTGTCATTATGCAGGGGAGGTCATTTATGATACAACTGGATTCCTAGAGAAGAACAGAGACCTATTACACTTGGATTCCATCCAACTTCTCTCCTCAAGCACGTGTCATCTTCCTCAGAAATTTGCAACCCAAATGCTCACTCAGACTGAGAAGCCTGCAGTTGGTCCCTTACACAAGTCAGGTGGAGCAGACTCCCAAAAGCTAAGTGTTGCCACAAAATTCAAGGGACAATTATTCCAACTGATGCAACGTTTAGAGAGCACTACACCACATTTTATTCGCTGCATTAAACCCAATAACCTCCAATCACCTGGATTATATGAGCAAGGCCTTGTACTGCAGCAGCTGAGATGTTGTGGGGTCCTGGAAGTAGTTCGAATATCGAGATCAGGCTTTCCCACTAGAATGTCCCACCAAAAGTTTGCCAGAAGGATGATTTTTGCATGGTTCTAA 2418 0.4098 MSKTSSVPPAFQSIKSLPPNFKVANNLNGGLSSKHGDVRLKSGDPIRSSSPANGALVVEVSKEVHDRAGNMDVFDEDSPYSGQVRLLQEEDRPSNGGEDSESVPLPLPSNSASSRESRWSDTTPYASKKKVQCWLQLSNGNWELVKIITSSGSESVVSLPDGKVLKVHDESLVSANPDILDGVDDLMQLSYLNEPSVLYNLQYRYNQNMIYTKAGPVLVAINPFKKVPLYGNDYIEAYKRKSIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNGKTLRNDNSSRFGKLIEIHFSETGKICGANIQTFLLEKSRVVQCNEGERSYHIFYQLCAGAPPSLRDKLNLRSAEDYKYLRQSNCYSIVGVNDAEEFRTVMEALEVVHISKEDQESVFAMLAAVLWLGNVSFTVIDNENHVQAVEDEGLLSVAKLIGCDIEDLKLTLTTRKMKVGNDNIVQKLKLSQAIDARDALAKSIYSCLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSCFKGERDKAFTVCHYAGEVIYDTTGFLEKNRDLLHLDSIQLLSSSTCHLPQKFATQMLTQTEKPAVGPLHKSGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNLQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRMIFAWF 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181251g00010 805 FunFam Myosin heavy chain 363 419 - -
Stsc181251g00010 805 PANTHER MYOSIN 175 800 - -
Stsc181251g00010 805 CDD MYSc_Myo8 195 799 IPR036022 -
Stsc181251g00010 805 Gene3D - 363 422 - -
Stsc181251g00010 805 SMART MYSc_2a 175 804 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc181251g00010 805 FunFam Unconventional myosin-XIX 551 743 - -
Stsc181251g00010 805 Gene3D Kinesin motor domain 184 782 IPR036961 -
Stsc181251g00010 805 MobiDBLite consensus disorder prediction 28 54 - -
Stsc181251g00010 805 Pfam Myosin head (motor domain) 183 799 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc181251g00010 805 Gene3D - 549 743 - -
Stsc181251g00010 805 MobiDBLite consensus disorder prediction 89 123 - -
Stsc181251g00010 805 PRINTS Myosin heavy chain signature 307 334 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc181251g00010 805 PRINTS Myosin heavy chain signature 211 230 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc181251g00010 805 PRINTS Myosin heavy chain signature 265 290 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc181251g00010 805 PRINTS Myosin heavy chain signature 592 620 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc181251g00010 805 PRINTS Myosin heavy chain signature 539 567 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc181251g00010 805 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 128 177 IPR004009 GO:0003774|GO:0005524|GO:0016459
Stsc181251g00010 805 ProSiteProfiles Myosin motor domain profile. 181 805 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc181251g00010 805 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 801 IPR027417 -
Stsc181251g00010 805 Gene3D Myosin VI head, motor domain, U50 subdomain 424 721 - -
Stsc181251g00010 805 MobiDBLite consensus disorder prediction 104 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181251g00010 Stsc-Chr181251 24352 30129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181251g00010 7 802 Myosins gene family AT1G50360 76.633 0.0 1245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181251g00010 - K10357 gmx:100801124 1375.92