Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181250g00016 ATGGGTGGTGGTGGTAATAATGGAAAAGGAGAATTGCCGTCGTTCACGGTAACGGTGACGAATCAAGAAGTTATTGCGGCGGTTTTGCCAATGCAAGAACACTGGTTGCCATTCTCAAACCTTGATCTCATTCTTCCACCCGTTGATGTTAGTGTCTTCTTTTGCTACAAAAATAACACCAACATGAGCTTTGGGTCCATGGTGAGGTCCCTTAAGAATGCATTGGCTCAGGCATTGGTTTCATATTATGCCTTTGCTGGTGAGGTGGTCCAAAACTCCATGGGTGAGCCTGAGCTTCTTTGCAATAACCGTGGTGTTGATTTTGTTGAGGCTGAGGCTGATCTTCATCTTCAGAACCTTAACTTTTACAACCCTGATGAATCCATTGAAGGCAAGCTTGTTCCAAACAAGAAGCATGGCGTCCTTGCTGTTCAGGCAACATATTTTAAATGTGGGGGGATAATTATGGCATGCACTTTCGATCATCGCATAGCAGATGCATACTCAGCAAACATGTTCCTAGTTTCATGGGCCCAGATAGCCCGGCCCATGAAGCCCGCCATCGTAGCGGCAACCTTGTCAGCGCCGAGTTTTCGCCGCTCCCTCCTCATTCCTCGACGCCCTCTTCGCATCCATCCTTCCCTCGACGATATGTATGTCCCCATTTCCACTCAGCCGCCGCCACTGCCGCCGCCGTCCGAACCTGAATCCGATAATTCTAACTCACTCATAAGCCGGATATATTACATCACGGCTGATCAACTCTGCCGCTTGCAATCACTTGCATGCTCATCATCATTAGATCATATCAAGAATCGGACAAAGCTTGAATCTTTCTCTGCGTTCTTGTGGAAGATGGTTGCCATGGCTGCTGCATCCTCCTCCTCTGCCATCCTTTCCGGTGGTAGCGGAAAAAGGCTTGTTGCCAAGATGGGTGTGGTGGTTGATGGAAGGAAGAGGCTTAGCTATGGTAACAAAAACAAAGAATCTATGATGGAGAATTATTTTGGTAATGTTCTTTCCATCCCTTTTGGCGGGAAACCGGTGGAGGACTTGGTGGAGAAGCCGTTGAGTTGGGTGGCAGAGGTGGTTCACAAATTTCTGGAGACAGCCGTGACAGAAGAACACTTTTTAGGACTAATTGACTGGGTGGAAGAGCACCGTCCCACGCCAGCATTAGCTAGGATCTATTCTGGCCAAACAACTGACGTGGGACCTGCTTTTGTGGTGTCCTCCGGACAAAGGTTTCCTCAATCAAAAATCGATTTTGGTTGGGGAAAACCTCTGCTTGGATCATACCATTTTCCTTGGGGTGGTGATGCCGGATATGTGATGCCAATGTTGAGTCCCAAGGGGAATGGTGATTGGGTGGTGTACATGCACCTTCTCAAAGGGCATATAGATTTCATTGAGTCTAAGGCAGCTCATGTCTTTAAGCCCTTAACTTGGGATTACCTCAACAATCAACATTATTAA 1476 0.4743 MGGGGNNGKGELPSFTVTVTNQEVIAAVLPMQEHWLPFSNLDLILPPVDVSVFFCYKNNTNMSFGSMVRSLKNALAQALVSYYAFAGEVVQNSMGEPELLCNNRGVDFVEAEADLHLQNLNFYNPDESIEGKLVPNKKHGVLAVQATYFKCGGIIMACTFDHRIADAYSANMFLVSWAQIARPMKPAIVAATLSAPSFRRSLLIPRRPLRIHPSLDDMYVPISTQPPPLPPPSEPESDNSNSLISRIYYITADQLCRLQSLACSSSLDHIKNRTKLESFSAFLWKMVAMAAASSSSAILSGGSGKRLVAKMGVVVDGRKRLSYGNKNKESMMENYFGNVLSIPFGGKPVEDLVEKPLSWVAEVVHKFLETAVTEEHFLGLIDWVEEHRPTPALARIYSGQTTDVGPAFVVSSGQRFPQSKIDFGWGKPLLGSYHFPWGGDAGYVMPMLSPKGNGDWVVYMHLLKGHIDFIESKAAHVFKPLTWDYLNNQHY 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181250g00016 491 Gene3D - 229 472 IPR023213 -
Stsc181250g00016 491 Pfam Transferase family 16 475 - -
Stsc181250g00016 491 Gene3D - 16 217 IPR023213 -
Stsc181250g00016 491 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 29 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181250g00016 Stsc-Chr181250 96234 98662 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181250g00016 39 471 Monolignol Biosynthesis Gene Families AT5G48930 28.251 6.81e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181250g00016 - - aip:107608222 693.345