Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181250g00015 ATGCAAGACCATTGGCTGCCATTCTCAAACCTTGACCTCCTTCTTCCACCGATTGATGCGAGCGTCTTCTTTTGCTACACTAACACTGAAATGCTGAGCTTTAAATCAATGGTGGGAACACTTAAAAGCTCACTAGCTAAAGCTCTGGTTCCCTATTATGTGTTGGCTGGTGAGGTGGTGCAAAACTCCATGGGAGAACCTGAGCTTCATTGCAATAACCGTGGGGTTGACTTTATTGAGGCTGAGGCTGATGTTGAACTTCGTAGTCTTAATTTGTATAATCCTGATGAATCCTTTGAAGGCAAGCTTGTTCCCAAGAAGAAACATGGCGTCCTCGCTGTTCAGGCAACTTGGTTAAAGTGTGGTGGGTTTCTAATAGCATGTACTATGGACCATCGCCTTATTGATGCTTACCGTGTAAAAATGTTCCTCGTTTCATGGGCCCAATTAGCCCAATCCACAAGGCCCATCACTCTAACCCATCAACCTTGCTATCGCCGGTCCCTCCTAAGCCCACGACGCCCCCCCTCAGCCCACCCTTCAATTGACCGCACGTATGTTCTCCTCGCCGACTTGCCTCCTCCACCAACTGAGCCCAAGACTGAGCCCAATTCAGGCCCAAACATTAGCCGCATATACTATTTCACTGTTGAAGAGCTTAACCACATACAAGCACTTGCAACCTCAACCGATTTCAAGCCCACGAAGTTCGTCTCATTCTCTGCATTCTTGTGGAAGATGGTTGCTACGGCTTCTTCTGCTTCCTCCTCTGCTGTTGTTGATGGTTGTAATAACAAAAGAGGCGTTGTGGCAAAAATGGGTATTGCAGTTGATGGAAGAATGAGGCTGAGCAATGGCGATAAGAAGAAGGAAGAACTCATGAATTCTTACTTTGGCAATGTGGTTTCCATTCCATTTGAAGGCGAAGAAGTGGAGAAGCTAATAGAAAAGCCGTTAAGCCAGGCGGCAGAGTTGGTTCGCGAGTTCTTAGAGGTGGCAACAACGGAGGGACACTTCTTAAGGCTCATTGACTGGGTGGAAATACACCGTCCTGCGCCGGCGGTGGCGAGAATTTCTGTTGAAACTAATGACGGGCCATGTTTTGTGGTATCTTCTGGAAGAAGGTTTCTTGAGTCAAACGTTGACTTTGGTTGGGGAAAGCCTGTGTTTGGATCATGTCACTTTCCATGGGAGGGTGGATGTGGGTATGTGATGCCATTTCCTAGCCCTAAAGGGAATGGTGATTGGGTGATCTTCATGAACCTTCAAAAGAATCTCTTGGAATTCATGGAATCTCATTTTCCTCATGTCTTTAGACCCTTATCTTGGGATTATCTTACCAACAAAATGTGA 1353 0.4649 MQDHWLPFSNLDLLLPPIDASVFFCYTNTEMLSFKSMVGTLKSSLAKALVPYYVLAGEVVQNSMGEPELHCNNRGVDFIEAEADVELRSLNLYNPDESFEGKLVPKKKHGVLAVQATWLKCGGFLIACTMDHRLIDAYRVKMFLVSWAQLAQSTRPITLTHQPCYRRSLLSPRRPPSAHPSIDRTYVLLADLPPPPTEPKTEPNSGPNISRIYYFTVEELNHIQALATSTDFKPTKFVSFSAFLWKMVATASSASSSAVVDGCNNKRGVVAKMGIAVDGRMRLSNGDKKKEELMNSYFGNVVSIPFEGEEVEKLIEKPLSQAAELVREFLEVATTEGHFLRLIDWVEIHRPAPAVARISVETNDGPCFVVSSGRRFLESNVDFGWGKPVFGSCHFPWEGGCGYVMPFPSPKGNGDWVIFMNLQKNLLEFMESHFPHVFRPLSWDYLTNKM 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181250g00015 450 Gene3D - 194 435 IPR023213 -
Stsc181250g00015 450 Gene3D - 1 185 IPR023213 -
Stsc181250g00015 450 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 409 - -
Stsc181250g00015 450 Pfam Transferase family 2 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181250g00015 Stsc-Chr181250 84236 87178 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181250g00015 9 431 Monolignol Biosynthesis Gene Families AT5G48930 27.689 7.07e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181250g00015 - - ahf:112746934 696.427