Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181250g00013 ATGGTGGTGAAGTTGTACGGTCCCACTTGTGCTTCTTCAAAGAGGGCTCTGGTTTGTTTGGTTGAGAAGGAAGTTGAATTTGAGGTTGTCCCTGTTGATATCAGCAAGGGTCAAGGCACTGAATTGCTTGGTAAGACAATAGAAGAGAGGGGTATTGTTGAACAATGGGTTGAAGTTGAAGCAAGTAGTTTTCACCCATGGGCATATAAATTGGCCATTCATGTTCTGTTTTCTTCACTAGTTGGAATCACTCCTGATCCAAAGGTTATTGAAGAGAGTGAAGCAAACTTAAAGAAGGTTTTGGATATTTATGAAGAGAGGCTTTCAAAGAGTAAGTATTTGGCTGGTGATTTCTTTAGCCTTGCTGAGATTAGTCACCTTCCCTTCATTGATTATATTGTCAACTATATGGGGAAAGAGTACTTGATCATGGATAGGAAGAATGTTAGTGCTTGGTGGGATGCTATAAGTAATAGACCTTCATGGAAGAAGGTTCTTGAGCTCTATCGAGCTCCGATCTAG 522 0.4061 MVVKLYGPTCASSKRALVCLVEKEVEFEVVPVDISKGQGTELLGKTIEERGIVEQWVEVEASSFHPWAYKLAIHVLFSSLVGITPDPKVIEESEANLKKVLDIYEERLSKSKYLAGDFFSLAEISHLPFIDYIVNYMGKEYLIMDRKNVSAWWDAISNRPSWKKVLELYRAPI 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181250g00013 173 Gene3D - 49 166 - -
Stsc181250g00013 173 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 37 - -
Stsc181250g00013 173 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 46 173 IPR010987 -
Stsc181250g00013 173 FunFam Glutathione S-transferase F2 44 166 - -
Stsc181250g00013 173 Pfam Glutathione S-transferase, C-terminal domain 73 160 IPR004046 -
Stsc181250g00013 173 SUPERFAMILY GST C-terminal domain-like 39 167 IPR036282 -
Stsc181250g00013 173 CDD GST_C_Phi 48 166 IPR034347 -
Stsc181250g00013 173 Gene3D Glutaredoxin 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181250g00013 Stsc-Chr181250 75779 77408 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181250g00013 1 173 Glutathione S-transferase Gene Family AT2G30870 46.977 4.32e-62 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181250g00013 K00799 - gmx:547951 251.136