Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181249g00009 ATGGCTTCTTCGGCGATGATACCCACCTACATGTCCTCGTCTAAGGGCGAGGATATGCAGGTAGACATCGAAAAGAACCAAAAAAGCCACGTAAGGTCCCAGTGGGTTCTTAACCCTCCGGAGCCACCAAGTCCATGGCGCGTGGTCACGGATTCAGTGGGGAAAAGTATCTCGCGTTTCCGGAAGAACTTTTTTTCACTGAGAGATGAATCATGGAGCAAGGTCTTGTTTTCAGCTTTGCAGAAGATTTTTCCGATCCTTGTGTGGGGAAGAAGCTACACTGCAACTAAGTTCAGGAAAGACTTGCTTGCTGGCCTCACTATTGCAAGTCTCTGTATTCCACAGAGCATTGGGTACGCGACCTTAGCAAACCTTGCTCCTCAATATGGCCTTTATACGAGTGTTGTGCCACCACTGATCTATGCCGTAATGGGAACGTCGCAAGAGATAGCAATAGGGCCGGTGGCGGTGGTGTCGCTGCTCTTGTCTTCAATGGTTGAGAAATTAAAAGATCCTGTTTCTGAACCAATGGCTTACACCAGACTTGTCTTGCTTGCCACTCTCTTTGCTGGTATTTTTCAGACCGCCTTTGGACTTTTCAGGCTGGGGTTCCTTGTGGATTTCTTGTCGCACGCAGCAATAGTTGGATTTGTGGGAGGAGCAGCCGTTGTTATTGGCCTTCAACAGTTGAAGGGACTCTTAGGAGTCTCTCATTTTACTACCAAAACCGACATTATCTCTGTCATTAAAGCTGTTTGGCAAGCAATTCATAATCCCTGGAATCCTCGCAATTTCATACTAGGATGCTCGTTCCTGGTATTCATCCTATCTACTAGATTTCTGGGTAAAAAGAAGAAGAAGCTGTTCTGGTTGGCATCAATTTCCCCTCTAATATCAGTTGTGCTATCAACTCTAATGGTTTTTGTGACACGTGCTGATAAGAATGGAGTCAAAATTGTGAAACATGTTAAAGGGGGATTGAATCCAAGCTCCATTCATATGTTGGATTTCAATGATCCCAATGTTGGAGAAGTCGCCAAAATTGGACTAATCGTTGCTGTTGTTGCCCTCACTGAATCTGTTGCTGTTGGACGGTCTTTTGCATCCATGAAAGGATACCAACTTAATGGGAACAAAGAAATGCTCTCAATTGGCTTCACCAACATAATAGGATCTTTCACCTCTTGCTATGTTGCTACTGGTTCATTCTCCCGAACTGCTGTGAACTATGCAGCAGGATGTGAAACATTAGTGTCAAACATAGTGATGGGAATGACAGTGTTGATATCGCTGCAGTTCTTGACAAAGTTATTATATTACACACCAACCGCCATTCTTGCTTCTGTGATCCTCTCAGCACTGCCTGGCCTCATAGATGTCAACGAAGCTTTGAGGATATGGAAGGTTGATAAGTTTGACTTCCTTGCTTGCCTTGCTGCCTTCTTCGGTGTCCTCTTTGCTTCTGTCGAGATTGGTCTTCTTGTTGCGGTGGCAGTATCATTTTCAAAGATAATTGTAATATCAATAAGACCAGGGACAGAAACTCTGGGAAAATTACCAGGAACCGATTTGTTTTATGATGTTAATCAGTATCCAATGGCTGTTAAGATTCCTGGCCTTCTCATTATACGTGTTAAGTCTGCATTGCTTTGCTTTGCAAATGCCACTTTCGTCCGAGAAAGGATCATGAAATGGGTCAGTGATGAGGAAGGAGAATCGGTGGATGACAAGGGAAATTCAATAACCCAAATTCAACTCGTAATCCTTGACATGTCCAATTTGGTGAACATTGACACCTCTGGAATTGCTGCTCTTGAGGAACTGCACAAGAGTTTATCCACACATAAGAAACAGTTAGCCATTGCAAACCCAAGGTGGCAAGTGATTCACAAGCTGAAGGTATCAAACTTTGTTAACAAAATCAATGGAAGAGTGTTTCTCACTGTTGAAGAAGCTGTTAGCTCCAAGATCCAGTGCTGA 1980 0.4379 MASSAMIPTYMSSSKGEDMQVDIEKNQKSHVRSQWVLNPPEPPSPWRVVTDSVGKSISRFRKNFFSLRDESWSKVLFSALQKIFPILVWGRSYTATKFRKDLLAGLTIASLCIPQSIGYATLANLAPQYGLYTSVVPPLIYAVMGTSQEIAIGPVAVVSLLLSSMVEKLKDPVSEPMAYTRLVLLATLFAGIFQTAFGLFRLGFLVDFLSHAAIVGFVGGAAVVIGLQQLKGLLGVSHFTTKTDIISVIKAVWQAIHNPWNPRNFILGCSFLVFILSTRFLGKKKKKLFWLASISPLISVVLSTLMVFVTRADKNGVKIVKHVKGGLNPSSIHMLDFNDPNVGEVAKIGLIVAVVALTESVAVGRSFASMKGYQLNGNKEMLSIGFTNIIGSFTSCYVATGSFSRTAVNYAAGCETLVSNIVMGMTVLISLQFLTKLLYYTPTAILASVILSALPGLIDVNEALRIWKVDKFDFLACLAAFFGVLFASVEIGLLVAVAVSFSKIIVISIRPGTETLGKLPGTDLFYDVNQYPMAVKIPGLLIIRVKSALLCFANATFVRERIMKWVSDEEGESVDDKGNSITQIQLVILDMSNLVNIDTSGIAALEELHKSLSTHKKQLAIANPRWQVIHKLKVSNFVNKINGRVFLTVEEAVSSKIQC 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181249g00009 659 CDD STAS_SulP_like_sulfate_transporter 531 647 - -
Stsc181249g00009 659 Gene3D STAS domain 510 657 IPR036513 -
Stsc181249g00009 659 NCBIfam sulfate permease 85 649 IPR001902 GO:0016020|GO:0055085
Stsc181249g00009 659 SUPERFAMILY SpoIIaa-like 535 654 IPR036513 -
Stsc181249g00009 659 ProSiteProfiles STAS domain profile. 550 656 IPR002645 -
Stsc181249g00009 659 PANTHER SULFATE TRANSPORTER 65 655 IPR001902 GO:0016020|GO:0055085
Stsc181249g00009 659 FunFam Sulfate transporter 31 510 658 - -
Stsc181249g00009 659 Pfam Sulfate permease family 98 479 IPR011547 GO:0016020
Stsc181249g00009 659 Pfam STAS domain 531 652 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181249g00009 Stsc-Chr181249 59795 70310 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181249g00009 3 655 Inorganic Solute Cotransporters AT5G10180 66.003 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181249g00009 K17469 - gmx:100817831 1035.02