Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181249g00008 ATGGTAGCTTCATCAGTAAGTAGTGCCGCAGTGAGTTGCACGTTGGAAGAGATGTTGGAATCTAAAGAAAAAGAAATGTACCAGCATTACTGGGTGCTCAATGCACCCGACCCACCTTACTTTTTCCGACAACTATTTGAAAATGTTAGGGACACAATCTTGCCTCCGAGTAATAGCAAAAATGGGTGTTCAACTCTCGTCGTCAACAACAACCAACAACCTTTGCCGAGAAGGTTGTTCGAGTTGTTGACAAGAATATTTCCCATCCTTGGTTCTTTAAAAGGATACAATATTCGCAAGTTTAAATTCGACGTGATGGCAGGTGTAACCGTTGCAAGCCTCGCCATTCCGCAGGGTATAGGGTTCGCTACTCTGGCGCAGCTAAGTCCTGAATATGGCTTATACACATGTTTTGGGCCACCTCTTATGTACGCAATGCTTACGAGTTCAAAGGAGATAGTGATTGGGAATGTATCAGTGGATTCACTCATCCTTTCTTCAATGATTGCCAACTTGAAAGATCCCATTCAAGATTCTCTTGCATACACTCAGCTTCTTCTCATTGCAACTTTCATTGCTGGTATCTTCCAACTTGCATTTGGAATCTTCAGGTTTGGATTCCTGGTGGATTATCTTTCACAGGCAACAATTGTGGGGTTCTTGGCAGCAGCTGCCTTAGGCATTGGAGCATATCAGTTTTTAGTATTGTTAGGAATCAGTAAATTCACTACAAAATCTGATTTAATTTCTGTCATCAAAATATTTTGGACATCGTTATTCAAGCACCCATCACAGTGGCATCCTTACAGCCTTACCCTTGGATTCTCGTTTCTCTGTTTCATCCTTTTTGCAAGATTCATGGGGAGAAGGAACAAGAAACTGTTCTGGTTGCCAACAATTGCTCCTCTGTTTTCAGTTATTGTATCTTCAGTTGTTGCATATACAGTGAATTCTCATGAAGTAAATGTGAAGGACTACAAAGTTGATGTGTTAGGAGAAATCAAAGGAGGTACCTTGAACCCAATCTCATTGTTGAATCTCAATCTTATGGACATGTTTTTGGGTCCATTGATCAAAACAGGGTTAACCGTTGCTGTTATTTCACTCACGGAAACTATTGCAGTTGGTAGGTCATTTGCATCACTAAGAGGATACAATCTTGATCCCAATAGAGAAATGATAACATTGGGTTTAACCAACATTTTTGGATCTTTCACCTCTTGTTACGTTGCATCTGGTTCACTTTCACGCACTGCTCTAAATTATAGTTCGGGTGCTGAAACAACGGTGTCAAGCATAGTGATGGCATTGACGGTTCTAATATCACTGAAATTCTTGACGAGGCTGTTATATTACACTCCGAAGGCAATCTTAGCAGCAATAATTATTTCAGTTGTGCCTGGTCTTATTGACATTCAAAAAGCTTATCAGATATGGAAGGTTGATAAACTTGACTTCCTGGCTTGCGCCGGAGCCTTTTTTGGGGTCTTATTCGGCTCCGTAGAGAAGGGCCTTGCAATTGCGGTGACAATATCATTTGCAAAGTTAATTGTGGTGGCAATTCAGCCTGGAATAACGGTTGTTGGAAGGCTTCCTGGAACAGATGTGTTTGGAGACATTGAGCAATATCCAATGGGCCTCTCCATTCCTGGCCTTTTGATTCTTTCTCCAAAATCTTCCTTCCTTTGCTTTGCAAATGCAACTCTTGTTAGAGAAAGGATTGAGAGATGGGTGAATGATGATGGACATGCTGAGGAAGAAGAGGGACGAAGCACTTTAAAATTCATCATTCTTGATATCTCAGGTCTTACGAATATTGACACAGCGGGAATTGCTTCTCTGGAGGAACTGAACAAGAATTTGATTTCACATGGAGTAAAGTTGGTGATGGCTAACCCAAGGTGGCAAGTAATCCACAAGCTAAGAGTAGCTGACTTTGTGAGCAAAATTGGAGGAAGAGTTTTCGTTTCTGTGGGTGAAGCTGTAGATGCATGTCTTGCTCTTGGTGCTGCAAAAATAATGCCTAATACTGTTTAA 2037 0.4124 MVASSVSSAAVSCTLEEMLESKEKEMYQHYWVLNAPDPPYFFRQLFENVRDTILPPSNSKNGCSTLVVNNNQQPLPRRLFELLTRIFPILGSLKGYNIRKFKFDVMAGVTVASLAIPQGIGFATLAQLSPEYGLYTCFGPPLMYAMLTSSKEIVIGNVSVDSLILSSMIANLKDPIQDSLAYTQLLLIATFIAGIFQLAFGIFRFGFLVDYLSQATIVGFLAAAALGIGAYQFLVLLGISKFTTKSDLISVIKIFWTSLFKHPSQWHPYSLTLGFSFLCFILFARFMGRRNKKLFWLPTIAPLFSVIVSSVVAYTVNSHEVNVKDYKVDVLGEIKGGTLNPISLLNLNLMDMFLGPLIKTGLTVAVISLTETIAVGRSFASLRGYNLDPNREMITLGLTNIFGSFTSCYVASGSLSRTALNYSSGAETTVSSIVMALTVLISLKFLTRLLYYTPKAILAAIIISVVPGLIDIQKAYQIWKVDKLDFLACAGAFFGVLFGSVEKGLAIAVTISFAKLIVVAIQPGITVVGRLPGTDVFGDIEQYPMGLSIPGLLILSPKSSFLCFANATLVRERIERWVNDDGHAEEEEGRSTLKFIILDISGLTNIDTAGIASLEELNKNLISHGVKLVMANPRWQVIHKLRVADFVSKIGGRVFVSVGEAVDACLALGAAKIMPNTV 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181249g00008 678 SUPERFAMILY SpoIIaa-like 550 665 IPR036513 -
Stsc181249g00008 678 Pfam STAS domain 549 661 IPR002645 -
Stsc181249g00008 678 ProSiteProfiles STAS domain profile. 562 665 IPR002645 -
Stsc181249g00008 678 NCBIfam sulfate permease 88 659 IPR001902 GO:0016020|GO:0055085
Stsc181249g00008 678 CDD STAS_SulP_like_sulfate_transporter 543 655 - -
Stsc181249g00008 678 PANTHER SULFATE TRANSPORTER 54 665 IPR001902 GO:0016020|GO:0055085
Stsc181249g00008 678 Pfam Sulfate permease family 101 490 IPR011547 GO:0016020
Stsc181249g00008 678 FunFam Sulfate transporter 31 522 667 - -
Stsc181249g00008 678 Gene3D STAS domain 522 667 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181249g00008 Stsc-Chr181249 43401 54118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181249g00008 2 668 Inorganic Solute Cotransporters AT5G10180 50.673 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181249g00008 K17469 - gmx:100817841 815.839