Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181248g00076 ATGGCCTTGTCCCTTCTTGTCGTTCCAAGTGTTGGTCGTCCTCTTAAAAGCCAAATCCACCCTCTTGAAAGTCTACGCCAGGTACTTTTATTTAAGGAGAACCTCTTTGTCGGAGGGTATCTTAGGCCCGGCAGGCCCAGACTAATCCCTTACGCCATATCGAGTGTTCATTTCGGAGGGTTTGACGTGGTCATATCCCCTTCTGCATACATGCCGCCTCCAAAGTTCAAATCCGGGAATAGACACTTAAGAAACTCAAGCCACTTACCACTTGTGCTAGGGGATGTGGAACTCGGTTCGGGGCACAGCCCGACCTCCACACATCGTAGAGTTGATGATTCGATTTGGGGCAATACAAGAAGGAGTTACGACCTACTTGGAAAACAAGTCCCCAGCCGACTTAAGGGAAGTTATAACCTACACGCAGAGTGTAACTGCAAGAAGCAGTTCCGCAGCGTAGATGTAGGAACTCCCTTCTATAACCGCCTTGCACGAACTGATAGGGAAGAGGGGACACACTATAAATATAACAATAAGATCATCAATAGAGGTATTGAACACTTACCCAATTTTCACTACTTACAACTTGCTAAAACTCCCACTGACTTAGGCATCGGAGTGCCTTACAGGTACACCTCCCAACCTGTTCCAGAGGAGATCACCGATCGTTCAAGTTTTAGGCTCATCAGGAAGCAGACTTCTAGATTCTTCACGTACAAAATTCAAATTGAGCTAAATCTTAAGAGCATAAAGGAGCTAATCTACAAGAAGGGACACTTGAAAATAGAGAATCAGGAAGTTCTTTTGACAGATAATAACATTATTGAGCAGGAATTGGGGAAGTATGGTATTGTTTGCATAGAATACACTGTGCATCAGATATATAATGTTGGTCCACACTTTAAGGAAGTTATCCAAATGTTGTGGCCCTTAGGACTCAACAAACTAGTAGGAGGATTGACAGGATCAAAAACCCTTTTCAAGGATGGTGGAGACTCGGGGAATCATGAAGATCTCATCAAGAACTAG 1029 0.4412 MALSLLVVPSVGRPLKSQIHPLESLRQVLLFKENLFVGGYLRPGRPRLIPYAISSVHFGGFDVVISPSAYMPPPKFKSGNRHLRNSSHLPLVLGDVELGSGHSPTSTHRRVDDSIWGNTRRSYDLLGKQVPSRLKGSYNLHAECNCKKQFRSVDVGTPFYNRLARTDREEGTHYKYNNKIINRGIEHLPNFHYLQLAKTPTDLGIGVPYRYTSQPVPEEITDRSSFRLIRKQTSRFFTYKIQIELNLKSIKELIYKKGHLKIENQEVLLTDNNIIEQELGKYGIVCIEYTVHQIYNVGPHFKEVIQMLWPLGLNKLVGGLTGSKTLFKDGGDSGNHEDLIKN 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181248g00076 342 PANTHER 60S RIBOSOMAL PROTEIN L7 245 341 IPR039699 -
Stsc181248g00076 342 SUPERFAMILY Ribosomal protein L30p/L7e 244 340 IPR036919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181248g00076 Stsc-Chr181248 365896 369966 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181248g00076 246 340 Cytoplasmic Ribosomal Protein Gene Family AT2G44120 51.579 1.89e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181248g00076 K02937 - gmx:100500005 149.058