Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181248g00056 ATGCCTACCCTCCTTATGATCATTGTGTTGTTGTTGATGATCTGCATCTCATGCACAACAAATGGTTTAAGCAGCTTCTCTCCGAAAGATAACTTCCTGATAGATTGCGCTGCTGAAAAAGTAGCAAGTCTCCCAGATGGAAGACAATTCAAAACAGATTCTGAATCCAAATCGTTCTTGCAAGCAACTGATGACACCAAAGTCTCTTCCAACGACCCAATTCCCAACCTACCCTCCCCAATCTACTCAAACGCAAGGATTTTCATTAAAAAAGCTAAATACACATTCCCTCTCACTCAACCTGGTTTTCATTGGCTTCGCCTTCATTTCTATCCAATCAAGAACACCATCTTTGAACTTCACACGGCCACCTTCTCTGTCAACACAGATAAGTATGTTCTTCTTCATTCCTTCAACGTCAACAATGACACCCCTCTTCTCAAGGAGTTCCTCATCAACGCCACCGACCCTCACTTCTCCATATACTTCATTCCAACCAAGGACTCTGCAGCATTCATCAATGCCATTGAGCTTGTTTCAGCTCCTGATAACCTCATCTTCGACACTGGCTCATCCCTTTTCCCCGTTGGAGACTTTTCAGGCTTGACCAACTACGCTTTCCAAACGCTTCACCGCATCAACAATGGTGGTCCTTTGATAACATCATCAAATGACACATTGGCAAGAACATGGCAATCTGATTCCGATGGATCTTACCTCACAAACAAGAACTTGGCAAAGAGTGTCTCTGTGGCTACCACTGCCATTAAGTTCCCTTCGAATACACCAACCATTTCTCCTCTGATTGCACCGCCAACAGTGTATGCTTCTGCCATGGAGATGGGTGATGCTGGTGTTGACGAGCCTAATTTCAACGTGTCATGGAAATTTGATGTGGACACAGCTTTTGATTACCTTGTAAGGCTGCATTTCTGTGATATTGTGAGCAAAGGGCTAAACCAACTCTACTTCAATGTATATGTGAATGGGAAGATGGCAGTTCCCAATTTGGATGTGTCAGCTATTACTGGAGCCTTGGCAACACCTTATTACAAGGACATTGTGGTTAATGCTTCTTTGATGTCTGATGAGGGGCTCACGGTTCAGGTTGGTCCTGCAAATGCTGAGGGTGGGAATGGCAATGCAATTATGAATGGAATTGAGGTCTTGAAGATAAGCAATTCTGTCGACAGTTTGGATGGTGAATTTGGTGTTGATGGAAGAAAAGCCGGTGGTTCAATCCGCGGCAAGGTGGCTACAGCTGGTTTTGCTATGATGTTTGGAGCCTTTGTAGGTCTTGGTGTGATGGTTATCAGGTGGAACAAGAGGCCGCCGGATTGGCAAAAAAGGAAAAGTTTCTCTTCATGGTTACTCCCTGTGCATGCAGGTGACACAAGCTTCATGAATAGCAAGACCTCAATGGGGTCTCACAAGAGCAATTTCTACTCCTCAACCATGGGACTAGGCAGGTTTTTCTCCCTTGCAGAGTTGCAAGAAGCTACCAAGAACTTTGACTCCAAAGAAATTATAGGTGTTGGAGGGTTTGGTAATGTGTACTTGGGTGTGATTGATGAAGGGACTACTAAAGTTGCTGTTAAGAGAGGGAATCCACAATCAGAACAAGGCATCAATGAGTTCCAAACTGAAATTCAAATGCTGTCTAAGCTAAGACACAGGCATTTGGTTTCCTTGATTGGATACTGTGATGAAAACTCTGAGATGATTCTGGTTTATGAATACATGCCCAATGGACATTTCAGGGACCATCTTTATGGCAAGAACTTGCCTCCTCTTTCTTGGAAGCAGAGATTAGAGATCTGCATAGGAGCGGCTCGCGGCCTTCACTACCTCCACACGGGCACAGCACAAGGTATCATCCACCGTGATGTTAAGACCACCAACATTCTCCTTGATGAGAATTTCAACGCCAAGGTTTCTGATTTCGGGCTCTCCAAGGATGCACCAATGGGGCAAGGCCATGTGAGCACTGCCGTTAAGGGTAGCTTTGGATATCTTGATCCTGAGTATTTCAGGAAGCAACAGTTGACAGAAAAATCAGATGTGTATTCATTTGGGGTGGTGTTGCTTGAGGCGCTATGCGCGAGGGCGGCCATTAATCCTCAGTTGCCTAGAGAACAAGTAAACCTGGCTGATTGGGCAATGCAGTGGAAGAGGAAGGGGATGGTTGATAAAATTGTAGATCCTCATCTTGCTGGTTCTTTGAATGCTGAATCCATGAAGAAATTTGCAGAGGCAGCTGAGAAGTGCTTGGCAGATTATGGTGTTGATAGGCCTACAATGGGGGATGTGTTGTGGAACTTGGAGTATGCATTGCAGCTTCAAGATGCATTCACACAAGAAGGAAAGGCTCAAGATCCCAGCAACTCCACTGCTGCTGTTCCTGCCCCTCCAACACCACCTCCTAATAATGTCAACAACCCCACCATAGTTGATGATCATAGTGCATCCAGCAGGGAACGGGAACTTCCTCCTCAACAAGTAAATGAAAATAATAATGGACCAACCCAAGTACCCCCCACTACTACTGATGATTATTCTGGAACAATGTTTTCCCAAGTTAACAATCTTAGTGGTAGATGA 2601 0.4487 MPTLLMIIVLLLMICISCTTNGLSSFSPKDNFLIDCAAEKVASLPDGRQFKTDSESKSFLQATDDTKVSSNDPIPNLPSPIYSNARIFIKKAKYTFPLTQPGFHWLRLHFYPIKNTIFELHTATFSVNTDKYVLLHSFNVNNDTPLLKEFLINATDPHFSIYFIPTKDSAAFINAIELVSAPDNLIFDTGSSLFPVGDFSGLTNYAFQTLHRINNGGPLITSSNDTLARTWQSDSDGSYLTNKNLAKSVSVATTAIKFPSNTPTISPLIAPPTVYASAMEMGDAGVDEPNFNVSWKFDVDTAFDYLVRLHFCDIVSKGLNQLYFNVYVNGKMAVPNLDVSAITGALATPYYKDIVVNASLMSDEGLTVQVGPANAEGGNGNAIMNGIEVLKISNSVDSLDGEFGVDGRKAGGSIRGKVATAGFAMMFGAFVGLGVMVIRWNKRPPDWQKRKSFSSWLLPVHAGDTSFMNSKTSMGSHKSNFYSSTMGLGRFFSLAELQEATKNFDSKEIIGVGGFGNVYLGVIDEGTTKVAVKRGNPQSEQGINEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEYMPNGHFRDHLYGKNLPPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFNAKVSDFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRKQQLTEKSDVYSFGVVLLEALCARAAINPQLPREQVNLADWAMQWKRKGMVDKIVDPHLAGSLNAESMKKFAEAAEKCLADYGVDRPTMGDVLWNLEYALQLQDAFTQEGKAQDPSNSTAAVPAPPTPPPNNVNNPTIVDDHSASSRERELPPQQVNENNNGPTQVPPTTTDDYSGTMFSQVNNLSGR 866
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc181248g00056 866 FunFam Receptor-like protein kinase FERONIA 581 793 - -
Stsc181248g00056 866 FunFam Receptor-like protein kinase FERONIA 206 394 - -
Stsc181248g00056 866 Pfam Protein tyrosine and serine/threonine kinase 507 712 IPR001245 GO:0004672|GO:0006468
Stsc181248g00056 866 FunFam receptor-like protein kinase FERONIA 467 580 - -
Stsc181248g00056 866 ProSitePatterns Protein kinases ATP-binding region signature. 510 533 IPR017441 GO:0005524
Stsc181248g00056 866 MobiDBLite consensus disorder prediction 827 866 - -
Stsc181248g00056 866 Gene3D Phosphorylase Kinase; domain 1 490 580 - -
Stsc181248g00056 866 FunFam Putative receptor-like protein kinase 31 182 - -
Stsc181248g00056 866 Gene3D - 205 394 - -
Stsc181248g00056 866 Gene3D - 31 182 - -
Stsc181248g00056 866 SUPERFAMILY Protein kinase-like (PK-like) 488 772 IPR011009 -
Stsc181248g00056 866 ProSiteProfiles Protein kinase domain profile. 504 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181248g00056 866 Gene3D Transferase(Phosphotransferase) domain 1 581 798 - -
Stsc181248g00056 866 Pfam Malectin-like domain 34 391 IPR024788 -
Stsc181248g00056 866 SMART serkin_6 504 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181248g00056 866 PANTHER OS07G0166700 PROTEIN 490 781 IPR045272 GO:0004714|GO:0006468
Stsc181248g00056 866 CDD STKc_IRAK 510 775 - -
Stsc181248g00056 866 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Stsc181248g00056 866 MobiDBLite consensus disorder prediction 785 866 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc181248g00056 Stsc-Chr181248 256339 258939 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181248g00056 24 866 Receptor kinase-like Gene Family AT4G39110 65.647 0.0 1137
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc181248g00056 Malectin_like 3e-35 CL0202
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181248g00056 - - tpra:123893803 1300.42