Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181247g00032 ATGGTGACCGGCGGAGACGAACCAGCGACGATCCAGTACATCCAGCGACAAATCGGCGATGAGCTTTCACGAAGGAGAATGGAGACGAAGCGGGACGATCTATGGTTTAGATTTCAATTGGAGCTTCCAGATTTGGTGATTGTTCGTCGATCTTTCAACGCAGACGACTTTGTTTTTCTTCTCGTTTCTATCATCTGCGTCGTTTTCTCCAATTTTTCGATGGAAGCTGGTAGTTTAGATCCATTACTAGAAGTGGATTCAGATCGTTCACACGAATCAGAGAACACAGAGCAGTTTTCATGTGATGTTGATGATCAGTATGTTCCAAAGGTTGAGATGGTTTTTGGATCACTCGAGGAAGCTCGGGATTTTTATCGGGATTATGCGAAATGCGTCGGGTTCGCTAAAAAAATAAGGAACACCAATAGGAGTAAGAAGTCCAACGAAATTCTGAACCAGCTACTTTCCTGCAATAGAGAGGGGAAAAGGAGGTCTAACGAACCTGTTTCAGAGAGGACAAAGGCTATATATCCTTCTAATTGCCCGGCAAGGATGTATGTTCATTTTTTGAAGATGATTGATAGTTGGGAGATATCAAAGGTGGTTTTGGAACATTCACATCCTTGCTGTCCAATTCAAGCAGAAATGTTCCCTCAACACCGACAAATCAGCATGCATGTTTGCCGTACAATTGAGATCAATGATTAG 708 0.4294 MVTGGDEPATIQYIQRQIGDELSRRRMETKRDDLWFRFQLELPDLVIVRRSFNADDFVFLLVSIICVVFSNFSMEAGSLDPLLEVDSDRSHESENTEQFSCDVDDQYVPKVEMVFGSLEEARDFYRDYAKCVGFAKKIRNTNRSKKSNEILNQLLSCNREGKRRSNEPVSERTKAIYPSNCPARMYVHFLKMIDSWEISKVVLEHSHPCCPIQAEMFPQHRQISMHVCRTIEIND 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181247g00032 235 Pfam FAR1 DNA-binding domain 123 210 IPR004330 -
Stsc181247g00032 235 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 85 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181247g00032 Stsc-Chr181247 189393 191091 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc181247g00032 FAR1 3.7e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181247g00032 - - aip:110271906 163.696