Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181247g00023 ATGAACCCTTCCTTGTCCATGATTGTGAACTTCTTGGAGTGTTCTAGAAGATTCCAGGTGGACCCGGTTGAGGCTTGCAAGAAAGTTGAGACGTTGAAGGGTTTGGGATTTTCCGATGACTTAGTGTCGAAGATTTTGGAGGGTTTTCCGAGTGTGATTGCAAGGTTGAAGCCCTTGATTCGTGAATTGAAGGAGTTAGGATTTTCTGTGCACGAAATTAGGAGTGAGGTAATTAGGGTGCCAAGGATTCTGGGAACGGAGATTGGAGAATTTTCGCAGTGCTTGCGGTTGCTAGAGG 298 0.4597 MNPSLSMIVNFLECSRRFQVDPVEACKKVETLKGLGFSDDLVSKILEGFPSVIARLKPLIRELKELGFSVHEIRSEVIRVPRILGTEIGEFSQCLRLLE 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181247g00023 99 Pfam mTERF 30 94 IPR003690 GO:0003690|GO:0006355
Stsc181247g00023 99 Gene3D Transcription termination factor 3, mitochondrial 6 99 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181247g00023 Stsc-Chr181247 153428 153848 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Stsc181247g00023 mTERF 9.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181247g00023 - - aip:107646489 107.071