Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181247g00006 ATGACTAGGATTTTCCCAACATATAATCATCATCATGTTCTTCGCTCGAGAATATTATTGCAAGAAAGCTTTAAAGATAATGTGGATGATTCTAATGAAGATTTTACAACATCCTTTTCCCTTACTTGCCAAACAGTGCAAGAGTTTCGGCCTCGGGGAATCTTCAATGGGGATGGCAGCATTCTTACAACCTCAACTTTCTCACTTCTAATGTTACATCTCATTCTTGTCTTCGTCGTCACTCGCATTCTTCGCATGCTTTTTAAGCCTCTCAAACAACCTAAGCTCATTTCTCAGATACTCGGTGGCATTATTCTTGGACCTTCTGTTATGGGACGCAGTGGGTGGTTCCAGCGTAATGTAATGCCTGACACAGCCCAATTCTTGGTGAACAATCTTGGAATAATGGGATTCATGTTCTTCTTCTTCATCTATGGTGTCAAGTGTGACCCAACCCTCTTGAAAAAATCAGGCAAATTGCATTTGTACACTGCACTTGTTGGTATAAGCATTCCCTCTGTTCTCACTTTCCTTGTCTCACTATACATGAGAAAGAACATGGACAAGGAACTTTCTAGAATAGCTTCAATGGGTGTAATCTCAGCCTACTTTGGGATCACAACATTCCCTGTTCTCCACAATATTCTGAAAGATCTCAACCTTCTAAACTCACATGTTGGGAGAATGGCTTTGTCAATGGCTTTAATTGGTGATGTACTTGGTACATGTTCCATTGTCATATTTGAGGCTGCAAAACATGGAGAAACAGGAGCAAAGAATGCAATTTGGTATACAATCTCTCTTGTCATGGTGTTCATGTTCATGATGTTTTGTGTGAGGCCCATGATGATGTGGATCCACAATAACACCCCAGAAGGGCACCCAGTGGAACAGTCCTATGTTGTTGTGATTCTCTTGGGTGTTTTTGTGTTGGGCTTTGTAACAGACATGTCTGGGATGGCAATTGCTAATGGGCCTTTATGGTTGGGCCTTGTGATCCCAGATGGGCCTCCTTTAGGAGCAACACTAGTGCAAAAGAGTAAGACTATTATGACTGATTTTCTGTTACCATTCTCATTCCTTATGGTGGGAACTCACACAGATGTGTTTGCAATGAGTGCTAGTGATTGGTCCCGTTTAGCACCATTGTTTTTCATGGTTTTAACTGGCTACTTGACCAAGTTCTTATCCACTTGGGTTGCTACATACTATTGGCAGTTGCCATTTAGAGAAGGACTTGCACTTAGCCTTATAATGAGCTTGAGGGGACAAGTTGAACTCATCGTGTTTGTTCATTTCATGGATAAGAAGATCGTAAACATTCCAGGCTTCACATTATTAGTGCTTATGACAGTAGCACTAACTGCAACATTCACTCCATTGATCTCCACAGTATATGATCCAACAAGGCCATACATTGTGAACCAAAGAAGGAACATTCAACACCATCTTCCAGACTCTAAGTTTTCAATGGTTCTATGCATTCAAGATGATGAAACCATTAACGGTCTCATCAATGTTCTTGACATATCAAACCCAAATTCAACTAGTCCCTTCATAGTTCATGCTCTTCGATTATTCGAGCTCGTCGGCCGCGCTTACCCTCTCTTTATAGACCATGACAAGCAAGAAATGCCCTCCAAGTATCAATGGACGCACACCATAAATGTTCTACAGAGGTATCAAGAACTCAAAGGGGAATTTCTGAAGCTGAAGCTTTTCACAGTTGTTTCCCCAACGAAAACAATGTTCCAAGACATTTGCTTGGTTGCTTTAGAGAATGAAGCTTCTTTGATCATCTTACCTTTCAAGAAACATAATGTTTATAAGAAGGGCATCTCAGTCCAAACCATGAACTCTCAAGTGCTGAATCATGCACCTTGTTCTATTGCCATTTTTGTTGATAAAGGTAATGATACTAGTAATCTTATTGAGACAATAAGCAATGTTGCAGCTGCTCCTTCTTCGTTTCGCCGATCCGGGCAGCAGTTCGCTCTGCTGTTTCTCGGCGGCGCGGACGCCAGAGAGGCTCTTGTTTATGCAGACATAATGTTAGCTGCTAACCAAGATGTGACTCTTACTGTGATAAGATTTTTGTCTGACAGCTATGTAGGGGATAAAGAAAGGGAGAAGAAGCTTGATGATGGAATTGTGACTTGGTTTTGGGTTAAGAATGAGAGGAACAACAGAGTGGTGTATAGAGAAGTGGTGGTTAAGAATGGAGAAGAAACCATTGCAAGTATTCAATCTATGAGTCATAGTAACAATGATGATGAAGGTTATGATCTTTGGATAGTTGGAAGAAAACAAGGGATAAACCCTGTTCTTCTTACAGGGTTATCAGAATGGAGTGAGAGCGAGAGTGAGGAATTAGGACTAATAGGGGATTATATTTCCTCTAAAGATTTTCCAAGTTCTGGTTCTGTTTTAGTTATACATCAACAGATTGTAAGAGGATAA 2460 0.4073 MTRIFPTYNHHHVLRSRILLQESFKDNVDDSNEDFTTSFSLTCQTVQEFRPRGIFNGDGSILTTSTFSLLMLHLILVFVVTRILRMLFKPLKQPKLISQILGGIILGPSVMGRSGWFQRNVMPDTAQFLVNNLGIMGFMFFFFIYGVKCDPTLLKKSGKLHLYTALVGISIPSVLTFLVSLYMRKNMDKELSRIASMGVISAYFGITTFPVLHNILKDLNLLNSHVGRMALSMALIGDVLGTCSIVIFEAAKHGETGAKNAIWYTISLVMVFMFMMFCVRPMMMWIHNNTPEGHPVEQSYVVVILLGVFVLGFVTDMSGMAIANGPLWLGLVIPDGPPLGATLVQKSKTIMTDFLLPFSFLMVGTHTDVFAMSASDWSRLAPLFFMVLTGYLTKFLSTWVATYYWQLPFREGLALSLIMSLRGQVELIVFVHFMDKKIVNIPGFTLLVLMTVALTATFTPLISTVYDPTRPYIVNQRRNIQHHLPDSKFSMVLCIQDDETINGLINVLDISNPNSTSPFIVHALRLFELVGRAYPLFIDHDKQEMPSKYQWTHTINVLQRYQELKGEFLKLKLFTVVSPTKTMFQDICLVALENEASLIILPFKKHNVYKKGISVQTMNSQVLNHAPCSIAIFVDKGNDTSNLIETISNVAAAPSSFRRSGQQFALLFLGGADAREALVYADIMLAANQDVTLTVIRFLSDSYVGDKEREKKLDDGIVTWFWVKNERNNRVVYREVVVKNGEETIASIQSMSHSNNDDEGYDLWIVGRKQGINPVLLTGLSEWSESESEELGLIGDYISSKDFPSSGSVLVIHQQIVRG 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181247g00006 819 Gene3D - 68 470 IPR038770 -
Stsc181247g00006 819 FunFam Cation/H(+) antiporter 24 68 473 - -
Stsc181247g00006 819 Pfam Sodium/hydrogen exchanger family 75 461 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc181247g00006 819 PANTHER CATION/H + ANTIPORTER 64 815 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181247g00006 Stsc-Chr181247 43021 47132 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181247g00006 31 816 Antiporter Super Family AT5G37060 41.677 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181247g00006 K26731 - gmx:100783296 908.672