Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181247g00002 ATGTCCTTGAGTTTGTCGAGGCAAATCGAATTCGGATTCGAGGTAGATCTCTTCAACTTCTTCCTTGGATACTTTTTAGTTCAACTCATGACCATTCACATTGCTCTTGCTTCTTTGGGTGCTTTGTTTTGTTATTTTCTCATGTTTCTTCGCTCTTACTTGGATTCCAAGCAACCTCCAAATGGGAGTAATGTTTCCCATTCGGTGGTGCAAATCACGTTCGAAATTGAAGATCCAAGAAGCGGAACAAGCAAAAAGGAACGTTTATATGAGATTCTTGGAATAGAGGAGAAAAGAGAGAACAATGTGATTTTTCCCATTGATATGGAAGATAAAATTCGCAAGGCGATTTTTGAAGGAGGGTGTGATGAAGAATGCTGCAATGTCTACATCACTTGGAGGAGACAAATCCTTGATCAGAAAATGAAGAAGATAGAGCTGCACAAGCTTCACATAAAAGAGATCAAAGATGTGCCGTTGGATTACTTGCAGAGAAAGATTCAACGCTGGATCATGGCTTTTGAATATTCTATTAGTATTCTGTTTTCTGAGGAAAGGAATCTAAGCAACTCTGTGTTTTTGGGGTGTTCTTCTAGTTCTAACAATGCTGATCTCTGTTTCATGGAGCTATGCAGGCCACCAATGACTCTGCTATTAGATTTTGTTAGCGCCGTGGCGAATGGAAAAGGCTCGCCATTGCGATTGTTTAGGCTTCTCAAGGTTTTTGAGGCATTGAAAGAAATGTTACCTGAGATTGAAACATTGTTCTCTGATCAATCCGGTGGCCTGGAAATAAGGGACATAGCGATTGGAATCTTGGCAAGGTTGAGGGAAGCAATCAAAGGTGTTTTCGCCGATTTGGAGAATCTTATATGTAAGAATGAGCCTTCAATTGGGATTGTTCATGGTGGGGGGATTCATCCAATTACTCATTATGTAATGAATTACCTTGGTGTTGTTTGCAATAAGTATTTGATGACATTGGAGCAAGTTTTTGAGAGCAACAACAATAATAATCATGGCATGGAATTTTATTTGGCTAAGATTTTGGAGATGTTGGAGAAGAGTTTGAAGGCTAATTCAAAAGAAATGTACAAGGACTCAAATTTAGGGATTGTTTTCGTGATGAACAATTACACATACATGGTTAATTGTATGAAACATAGTAAATTAGGAGAGTTGTTTGGAGAAAATTGGATCAAGAATAACATCATAGCGAAATTTCGCCAATGTTATGGAAATTACAAGGCAAATTCATGGGATCAAGTATTCAGAGAGAAGCTTAGTGTTGGAGAGTTTGTGATGGAATTTGAGGAGATATGTGATGTGCAATCAAGTTGGGTTATCTTTGATGATCAACTAAGAAGGCAAATTAGAAATGACTTGAAAGAAACATTGTTGGCAAGGATCAAAAGTGTTATTGAAAGATCACAAGAAGAAGTTAATATTTGGGGTGATTTTGGGTTTGAGGTCAAAGATATTGTGACCGGAATAGATAAGTTGTTTAAGGGAAGAGATGAGCTCAAAAACCACAGAGATTTGCATCCAACATGGACTGCAGCCTTGCATGAGCACAATATCAAGGATTTTCATAAATATTGGAAGAAGCATGCTCAGAAAACGTTGCTTGGTTCTTCATATCCAATGTAA 1650 0.3794 MSLSLSRQIEFGFEVDLFNFFLGYFLVQLMTIHIALASLGALFCYFLMFLRSYLDSKQPPNGSNVSHSVVQITFEIEDPRSGTSKKERLYEILGIEEKRENNVIFPIDMEDKIRKAIFEGGCDEECCNVYITWRRQILDQKMKKIELHKLHIKEIKDVPLDYLQRKIQRWIMAFEYSISILFSEERNLSNSVFLGCSSSSNNADLCFMELCRPPMTLLLDFVSAVANGKGSPLRLFRLLKVFEALKEMLPEIETLFSDQSGGLEIRDIAIGILARLREAIKGVFADLENLICKNEPSIGIVHGGGIHPITHYVMNYLGVVCNKYLMTLEQVFESNNNNNHGMEFYLAKILEMLEKSLKANSKEMYKDSNLGIVFVMNNYTYMVNCMKHSKLGELFGENWIKNNIIAKFRQCYGNYKANSWDQVFREKLSVGEFVMEFEEICDVQSSWVIFDDQLRRQIRNDLKETLLARIKSVIERSQEEVNIWGDFGFEVKDIVTGIDKLFKGRDELKNHRDLHPTWTAALHEHNIKDFHKYWKKHAQKTLLGSSYPM 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181247g00002 549 Gene3D Exocyst complex component Exo70 82 512 - -
Stsc181247g00002 549 PANTHER EXOCYST COMPLEX PROTEIN EXO70 112 504 IPR004140 GO:0000145|GO:0006887
Stsc181247g00002 549 Pfam Exo70 exocyst complex subunit 168 469 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc181247g00002 549 SUPERFAMILY Cullin repeat-like 112 474 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181247g00002 Stsc-Chr181247 19052 21533 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181247g00002 112 504 EXO70 exocyst subunit family AT5G58430 38.915 4.42e-81 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181247g00002 K07195 - aip:107644445 796.964