Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181246g00064 ATGGCTATGCTACTCTCACACACCTCAACCTTCCCTACTTTCAATTTACACACGCAGAAACCGCTTCTTCCCTCATCCATCTCTCGTTTCCCTCTTACTATCAGATGCCAATCTGTTAACACCGAGAAGGAGCGCAAATCGAACAGAAACCTGTTAGACAATGCTAGCAACCTGCTTACTAACTTCCTCAGTGGTGGAAGCATAGGATCCATGCCTATTGCTGAAGGTGCTGTCACCGATCTCTTTGGTCGACCTCTCTTTTTTTCGCTATACGATTGGTTCTTGGAGCATGGCTCTGTTTACAAACTTGCGTTTGGGCCCAAAGCATTTGTTGTTGTATCGGATCCCATAGTTGCAAGACATATTCTGCGAGAAAATGCATTTTCTTATGACAAGGGAGTACTTGCGGATATCCTAGAGCCAATAATGGGCAAAGGACTCATACCTGCGGACCTTGATACTTGGAAGCAAAGAAGAAGAGTTATTGCTCCGGGTTTCCATGCGTCGTACTTGGAAGCCATGGTCAAAATATTCAGAACTTGCTCAGAAAGAACAATATCAAAGATCAATCAGCTTCTTGAACAAGAGGGCAATGATGGACAGAAGTTGGTTGAATTAGATCTTGAGGCGGAGTTTTCTAATTTGGCTCTTGACATTATTGGACTTGGTGTGTTCAACTATGACTTTGGTTCTGTCACCAAAGAATCTCCTGTTATTAAGGCAGTCTATGGCACTCTTTTTGAAGCGGAGCATAGGTCCACTTTCTACATTCCATATTGGAAAGTTCCATTGGCAACATTTATAGAAACAGATGTTGAGAAACTGCAGCAAAGGGACTACTTAAATTTGAAGGATGCAAGTCTCTTGCGTTTCTTGGTTGATATGCGGGGAGCTGATGTTGATGATCGTCAGTTGAGGGATGATTTAATGACAATGCTTATTGCTGGTCATGAGACAACAGCTGCAGTTCTTACTTGGGCAACTTTCCTTCTATCTCAAAACCCTGACAAAATGAGGAAGGCTCAAGCAGAGGTAGATTCGGTGCTGGCTACGGGGACCCCAACTTACGAATCACTTAAAAAATTGCAGTACATCAGACTTATTGTTGTGGAGTCTCTCCGTTTGTATCCTCAACCACCTTTGCTGATTAGGCGTTCACTCAAACCCGATGTTTTACCAGGAGGCTACAAAGGTGATAAAGATGGTTATGCGATTCCTGCCGGGACTGACGTCTTCCTCTCTGTATATAATATGCATAGATCTCCATATTTTTGGGAGCGTCCTGATGAGTTTGAACCAGAGAGGTTTCTGGTGCAAAGAACGAACGAACAAATTGAAGGATGGGCTGGTTTTGACCCATCTAGAAGCCCTGGAGCCTTGTACCCAAACGAGATAATATCGGATTTTGCATTCTTGCCTTTTGGTGGTGGACCACGAAAATGCGTTGGGGACCAATTTGCTCTGATGGAGTCCACTGTAGCGTTGGCTATGCTGCTGCAGAACTTTGATGTGCAATTGAAGGGGACCCCCGATTCGGTTGAGCTAGTTACCGGGGCAACTATCCACACCAAAAATGGATTGTGGTGCAAATTGACTAAGAGATCTAATTTCCACTGA 1617 0.4409 MAMLLSHTSTFPTFNLHTQKPLLPSSISRFPLTIRCQSVNTEKERKSNRNLLDNASNLLTNFLSGGSIGSMPIAEGAVTDLFGRPLFFSLYDWFLEHGSVYKLAFGPKAFVVVSDPIVARHILRENAFSYDKGVLADILEPIMGKGLIPADLDTWKQRRRVIAPGFHASYLEAMVKIFRTCSERTISKINQLLEQEGNDGQKLVELDLEAEFSNLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKVPLATFIETDVEKLQQRDYLNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWATFLLSQNPDKMRKAQAEVDSVLATGTPTYESLKKLQYIRLIVVESLRLYPQPPLLIRRSLKPDVLPGGYKGDKDGYAIPAGTDVFLSVYNMHRSPYFWERPDEFEPERFLVQRTNEQIEGWAGFDPSRSPGALYPNEIISDFAFLPFGGGPRKCVGDQFALMESTVALAMLLQNFDVQLKGTPDSVELVTGATIHTKNGLWCKLTKRSNFH 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181246g00064 538 SUPERFAMILY Cytochrome P450 81 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181246g00064 538 Gene3D Cytochrome P450 70 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181246g00064 538 CDD CYP97 88 528 - -
Stsc181246g00064 538 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181246g00064 538 PRINTS P450 superfamily signature 481 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181246g00064 538 PRINTS P450 superfamily signature 472 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181246g00064 538 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181246g00064 538 PANTHER CYTOCHROME P450 FAMILY 4 97 534 - -
Stsc181246g00064 538 Pfam Cytochrome P450 94 527 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181246g00064 538 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 474 483 IPR017972 GO:0005506|GO:0016705
Stsc181246g00064 538 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181246g00064 538 PRINTS E-class P450 group I signature 94 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181246g00064 538 PRINTS E-class P450 group I signature 471 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181246g00064 538 PRINTS E-class P450 group I signature 481 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181246g00064 538 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181246g00064 Stsc-Chr181246 304662 309587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181246g00064 24 536 Cytochrome P450 AT4G15110 72.860 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181246g00064 K24543 - gmx:606504 898.656