Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181246g00057 ATGTCTAACTTGCTAATAACTTTGTTCTTAATTTCCATTATTGAACTCTTGTTGCTTCCTAACGAAACAAGAAGCAAAACCACTTCTCCATCAGCTTATTGTGGAACCAGATACTGTGGAAGCTCTGAAGTTGCCATTGAGTTCCCTTTCCATTTTGTTGAAGGAGATGAACGATATCGATGCGGGTACCAAGGTTTTGAGGTTTCTTGTAAGCAAAGTAAATTGATGATTAGTCTCCCAAATGGAGGAGGAGAATTCACTGTCAAAAACATCTCTCTAGAGCACCAATATATTTGGATTAAAGACCCTAATGATTGTCTTGCTAAACGGTTCTTGCAAGGCAATGACCTCATCAAAGATTCACCCTTCCTATGGGGCCTTCCAAATTCAAAGAAAGTGATGTTATACAATTGCAGCGAATCAGAATCAGCAGGGATTGATGTCGATCCACAACTACGTGTTCCTTGCCTAAGTGACAATGAGAAGCATTATTATTCTGTTATAGTTTTATCAGAGTCAGATGCTGAGAATGAGGATTATTATAGTTCAAAGTGTAGGAATATTGGGTCTGCTTTGTTTCCGGTTAAGGATGCTTCCGAAGAAGATGATTCTTCATCATCATCACGGAGAATAAGAGATGAACTTGTTCATTTTGATTTGAAGCTGCAATGGTTTAGGCCTAGTTGTTACTGTAAGGAGGATCAACACTGTGGCTTCATACCAAATGCTGATTTTGACGTTGTTTGTTACAACCACAATAATCAAGAACAAGATACGTTGCTTCAAGTTGAACTTGACAGCAATGATGGTGGAAATCCTGTGCCTCCAACTCCAAATCAGAAGAGAAAGGCTACGACAGAGAACGATGAGGATCCAACAGGCGCGAGAAAGGAGAATTTTACTAAGCGAATTGAGACAGCTACGAATGCTAGAGCTAAGCAGAGTAAGAACAATGGAATCGTTATCAATGAGTGA 975 0.3949 MSNLLITLFLISIIELLLLPNETRSKTTSPSAYCGTRYCGSSEVAIEFPFHFVEGDERYRCGYQGFEVSCKQSKLMISLPNGGGEFTVKNISLEHQYIWIKDPNDCLAKRFLQGNDLIKDSPFLWGLPNSKKVMLYNCSESESAGIDVDPQLRVPCLSDNEKHYYSVIVLSESDAENEDYYSSKCRNIGSALFPVKDASEEDDSSSSSRRIRDELVHFDLKLQWFRPSCYCKEDQHCGFIPNADFDVVCYNHNNQEQDTLLQVELDSNDGGNPVPPTPNQKRKATTENDEDPTGARKENFTKRIETATNARAKQSKNNGIVINE 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181246g00057 324 MobiDBLite consensus disorder prediction 305 324 - -
Stsc181246g00057 324 MobiDBLite consensus disorder prediction 283 304 - -
Stsc181246g00057 324 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 9 255 IPR046948 -
Stsc181246g00057 324 MobiDBLite consensus disorder prediction 265 282 - -
Stsc181246g00057 324 MobiDBLite consensus disorder prediction 265 324 - -
Stsc181246g00057 324 Pfam Wall-associated receptor kinase galacturonan-binding 34 102 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181246g00057 Stsc-Chr181246 274681 275987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181246g00057 34 254 C3H Transcription Factor Family AT2G46495 27.232 6.46e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181246g00057 - - ahf:112801412 425.631