Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181246g00047 ATGCAGGAAGTAATGGGCCAAGAATTTTCGCATGAAGAGGTTAATAGTGAGCATATATCATATGACCAGCATGAGAAGGACAATGAAGAGCAGGAGGAAGTCGACATGGAGTATATGGATGAAGATGAGCCAAATGTGGAACCAATGTTTGATGATCGCAGCGTTGAAGAAGGGTGTAGCATTGATTCACTCGAAGACATTGGAATGATTGAATTCTGGAACATAAGAGATGAAGACGTATGTCACTTTTACTTTTTTGACGTCGACGTTGCATTTGAGTTCTACAATAGGTATGCATTGACAAGAGGGTTTAGTACTCGGAAGAACAAGACTAGAAAGAGTCGAGCAGGTGTACTTGAATCGAAGAACTTTGTTTGTTACCGTGAGGGATTTAGACTACAAAACAATTATGACATTGGAAACTGTAAGAAAAAGCAAAGGCCAGAGACAAGGTGTGGCTGTAGTGCAATGATGGAGATTCGTTTAGATGCACCTAGTGGTCGTTGGTTTATTTCATATTTATCTGATGAGCACAATGATCAGAGAAATTTGAATGAGGACTTCGAGATTCATGTAATATTATTTATAATATTTTAA 597 0.3836 MQEVMGQEFSHEEVNSEHISYDQHEKDNEEQEEVDMEYMDEDEPNVEPMFDDRSVEEGCSIDSLEDIGMIEFWNIRDEDVCHFYFFDVDVAFEFYNRYALTRGFSTRKNKTRKSRAGVLESKNFVCYREGFRLQNNYDIGNCKKKQRPETRCGCSAMMEIRLDAPSGRWFISYLSDEHNDQRNLNEDFEIHVILFIIF 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181246g00047 198 MobiDBLite consensus disorder prediction 10 27 - -
Stsc181246g00047 198 MobiDBLite consensus disorder prediction 1 39 - -
Stsc181246g00047 198 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 14 179 - -
Stsc181246g00047 198 Pfam FAR1 DNA-binding domain 93 180 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181246g00047 Stsc-Chr181246 223770 226690 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc181246g00047 FAR1 1e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181246g00047 - - ahf:112723376 284.263