Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181246g00024 ATGGACGAAGCAGCCGGGGAGATCCCGGTAGCGTTTGTGGTCAGGAAGGTTGGAAGCATGATTTCTGCAAAGCAAATAATGGATTATGTTGCTGAGCAGGTTGCTCCATACAAGAAGGTTAGGAAAGTGGTCTTCATTGAAAGGATACCAAGATCTCCAACCGGGAAGATCCTTCGGAGGCAGCTTAGGAATTACTCCGCTTCTAAACTCTAA 213 0.4695 MDEAAGEIPVAFVVRKVGSMISAKQIMDYVAEQVAPYKKVRKVVFIERIPRSPTGKILRRQLRNYSASKL 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181246g00024 70 Pfam AMP-binding enzyme C-terminal domain 2 56 IPR025110 -
Stsc181246g00024 70 SUPERFAMILY Acetyl-CoA synthetase-like 2 66 - -
Stsc181246g00024 70 Gene3D - 1 69 IPR045851 -
Stsc181246g00024 70 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 2 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181246g00024 Stsc-Chr181246 120312 120648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181246g00024 2 70 Monolignol Biosynthesis Gene Families AT5G63380 60.274 3.00e-23 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181246g00024 K01904 - gmx:100804808 108.997