Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181246g00019 ATGGGAAGTAGTTATGGTGACGGCGGCAGCGGAGGAGAAGGTGGTTATGGGATGGTGATGAGTATGACAAGAGAGCCTAAGCCTCGGTTGAGGTGGACAGCCGATCTTCATGATCGCTTTGTGGATGCTGTCACTAAGCTTGGTGGCCCTGACAAAGCAACTCCCAAATCTGTTCTGAGGATAATGGGTTTGAAAGGCTTAACATTGTATCATTTGAAGAGTCACTTACAGAAGTATAGACTTGGACAGCAAGCAAGAAAACAAAATGAAGAACATCACAAAGAGAATAATAGATATTCATATATGAATTTCAGCAATAGCTCTTCAGGAGGAGAAATCCCCATAACAGAAGCATTGAGGCAACAAATTGAAGTCCAAAAGAGATTGGAAGAACAGCTAGAGGTACAGAAGAAATTACAGATGAGAATAGAGGCTCAAGGGAAGTATTTACAAGCTGTGTTAGAGAAAGCTCAGAGGACACTTTCCATGGAAGGTTCAGGCAATAATCTAGAAGCATCACGAGCTCAATTGACCGAATTCAACTCCGCCTTGTCTAATTTCATGGAAAATATGAACAACAAAGATAGCAAAGAAAGCATATTAGACATGAATAATGGTTTTTATAGTAAAGGCCCTCCTGGTTCAAGTTTCCCTAATTACCATGAAGTAGTTGAAAGAGGAGAAAATATTGATAAGAAGCCTAAGATTGAAGAGGGTTCTATTCAATTTGGGTTAAACATCAAAGGTAGCTATGATCTTGTATCTGCAAGTGGTGGATCTGAAATTGAAGGCAAAATGCTTTCATCATATAGGCTATGA 819 0.398 MGSSYGDGGSGGEGGYGMVMSMTREPKPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRIMGLKGLTLYHLKSHLQKYRLGQQARKQNEEHHKENNRYSYMNFSNSSSGGEIPITEALRQQIEVQKRLEEQLEVQKKLQMRIEAQGKYLQAVLEKAQRTLSMEGSGNNLEASRAQLTEFNSALSNFMENMNNKDSKESILDMNNGFYSKGPPGSSFPNYHEVVERGENIDKKPKIEEGSIQFGLNIKGSYDLVSASGGSEIEGKMLSSYRL 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181246g00019 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 24 84 IPR017930 -
Stsc181246g00019 272 MobiDBLite consensus disorder prediction 1 20 - -
Stsc181246g00019 272 NCBIfam myb-like DNA-binding domain, SHAQKYF class 27 82 IPR006447 GO:0003677
Stsc181246g00019 272 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 16 196 IPR044848 GO:0003700
Stsc181246g00019 272 Pfam Myb-like DNA-binding domain 30 80 IPR001005 -
Stsc181246g00019 272 Gene3D - 26 84 - -
Stsc181246g00019 272 Pfam MYB-CC type transfactor, LHEQLE motif 114 160 IPR025756 -
Stsc181246g00019 272 Coils Coil 116 146 - -
Stsc181246g00019 272 FunFam Myb family transcription factor 26 84 - -
Stsc181246g00019 272 SUPERFAMILY Homeodomain-like 26 84 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181246g00019 Stsc-Chr181246 87872 90163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181246g00019 4 180 G2-like Transcription Factor Family AT4G13640 50.521 5.00e-60 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Stsc181246g00019 Myb_DNA-binding 6.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181246g00019 - - gmx:100810146 371.318