Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181246g00005 ATGGCAGATTCTTCATTGTTGAGGGTAGAGCACATAGCAGGAAAAGGAAGAGGCCTTGTAGCTTCACAACCTCTGAAATCTGGTCAAGTTATCCTCACTGAATCCCCTCTCATTCTCTATTCTTCTTCCCCTCTCTTCCCTCCTCCTCCTTCTTCTTCTTACTGTGATCACTGCTTCAGAACTCTACCTACTACTACTAGCACTGTTTCATGTCCTTCTTGTCTGAACCACCATTTCTGCAGCAACAAATGCCTCTCTTCAGCCCTTAACTCCTCTCACTCCTCCATTCTCTGTCAAGCACTCTCATCACTTTCAAATTCACCACTTCTTCAACAACAACCCCTTCAACGCCAAGTCCAAGCTCGTTTTGTTGTTGCTCTTCACAACCTTGCACTCACTGATGCTGCTTCTTCTCAGATTGATACTTTGCTTTCTCTTCATGGCACCCCAGATGATTCTATTCTTCAAGATGCAAACTTTCTTCATGATCTGATCTCACCCCTTTTTAACAACATTAAGCTTATTAGTGTTGATGTGATTGCTGAGGCTCTTGCAAAGGATAGGATCAATTCCTTCTGCTTGATGGAGCCTTATAACCCTAATGGACCTCAGAGATCAATTAAGGCATATGGGATATACCCTAAAGCCACAATGTTTAACCATGATTGTATTCCCAATGCATGCAGGTTTGATTATGTGGACACTACTGATAATGATGATGATGATGGGCACAACAACACTGACATGATTATAAGGTTGATTAAGGATGTTGATGAAGGAGAAGAGGTTTGCATAAGCTATTTTAGGATTGGGAGGGACTATGCTACAAGGAAGAAGATCTTGATGGATGATTATGGGTTTGTTTGTGGGTGTGAGAGGTGCAAGATTGAAGCAACTTGGAATGAAGATAAGATTGATGATGATGGTGATGTGGCAGAACATGTAAGGTTTTTGAGGAAGTATGTTTGTGATGTGAAGAATTGTGGTGGAACTATGGCTCCTCTTCCTCCAAAACATGATGATTCACCATCTAATGTTCTTGAGTGTAATTTTTGTGGCAATTTCAAAATCACTGATCATCTTATATAG 1089 0.4105 MADSSLLRVEHIAGKGRGLVASQPLKSGQVILTESPLILYSSSPLFPPPPSSSYCDHCFRTLPTTTSTVSCPSCLNHHFCSNKCLSSALNSSHSSILCQALSSLSNSPLLQQQPLQRQVQARFVVALHNLALTDAASSQIDTLLSLHGTPDDSILQDANFLHDLISPLFNNIKLISVDVIAEALAKDRINSFCLMEPYNPNGPQRSIKAYGIYPKATMFNHDCIPNACRFDYVDTTDNDDDDGHNNTDMIIRLIKDVDEGEEVCISYFRIGRDYATRKKILMDDYGFVCGCERCKIEATWNEDKIDDDGDVAEHVRFLRKYVCDVKNCGGTMAPLPPKHDDSPSNVLECNFCGNFKITDHLI 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181246g00005 362 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 312 359 IPR044238 -
Stsc181246g00005 362 ProSitePatterns Zinc finger MYND-type signature. 55 98 IPR002893 -
Stsc181246g00005 362 Pfam SET domain 16 267 IPR001214 GO:0005515
Stsc181246g00005 362 Gene3D - 54 111 - -
Stsc181246g00005 362 Gene3D SET domain 18 295 IPR046341 -
Stsc181246g00005 362 SUPERFAMILY SET domain 5 289 IPR046341 -
Stsc181246g00005 362 CDD SET_SMYD 190 294 - -
Stsc181246g00005 362 Gene3D - 112 191 - -
Stsc181246g00005 362 ProSiteProfiles SET domain profile. 1 268 IPR001214 GO:0005515
Stsc181246g00005 362 SMART set_7 5 274 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181246g00005 Stsc-Chr181246 30921 32084 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Stsc181246g00005 SET 5.4e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181246g00005 - - gmx:100808530 444.506