Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181246g00002 ATGGAGAGGTACAAGTTAATTAAGGAAGTCGGTGATGGAACATTTGGGAGTGTTTGGAGAGCTATTAATAAGCAAACTGGAGAAGTTGTTGCAATTAAGAAAATGAAGAAGAAATATTACTCTTGGGAGGAGTGTGTAAACTTGAGAGAAGTCAAGTCATTAAGAAAAATGAACCACCCAAATATTGTGAAGCTAAAGGAAGTTATTCGAGAAAGTGACATTCTGTATTTTGTTTTTGAGTACATGGAATGCAACCTGTACCAACTTATGAAAGACAGGGAAAAGGTGTTTTCTGAGGGTGAAGTTAGGAATTGGTGTTTTCAAGTTTTCCAAGGTCTTGCTTATATGCACCAGCGTGGATATTTCCACCGTGATCTGAAGCCTGAAAACTTGCTGGTTACCAAGGATATCATAAAAATTGCTGATTTTGGCCTAGCACGCGAGATCAGTTCACAACCACCCTACACTGAGTATGTCTCCACACGATGGTATCGTGCTCCTGAAGTGCTACTTCAATCTTATATGTATAGCTCCAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAGCTGTTCTCTCTTCGTCCTCTTTTCCCGGGTGCCAGTGAAGCGGATGAGATCTACAAAATATGTGGTGTAATAGGCAGCCCAACTATTGAATCATGGGCTGATGGGCTGAAACTTGCAAGGGATATAAACTATCAGTTCCCACAGTTTGCTGGTGTACATCTTTCGGGACTGATACCATCTGCAAGTGATGATGCAGTCAGCCTTATCAGGTCACTTTGCTCGTGGGATCCTTGCAAGAGGCCAACAGCTGCAGAGGCCCTTCAACATCCCTTTTTCCAGAGTTGTTTTTACATTCCTCCGTCCCTTCGCACTAGAGCAGTGTCGAGAACTCCTCCATCTGCTGGAACAAGGGGAGCCCTTGATCAGCAAGGGGTTAGGAGATATTCTGGGGCGTTGCCTAATTCAAAGCTCACCAATAACTTCTCTTCTCCGAAATTACATCCTCCTTTAGCTTCAGGTGTGCAACGTAAGCTGGATTTGGTGAATCAGAATGGAAATAAGAATGAGAAGTCCATGAATACTGTTGTTAAACAATCAAAATATCGACAGCCCGGAAAAGACAGCCCAACTTCTATGAACAAGGGGAGGAATGCGAGGGCAATTTCTGAAACAACCGATAGGTTGGCCAATATGAATGTTGGTAGTGGTACTCGAAGACATTCTATAGCGCAACCCCGCCCTCCTCCAATGAAGGCTGGAGTTAATTGGATTTCTGAATCTGGAAACTTCATGCTGAGACCTGCACAGCCAATTCCGACCGGAAGAACTTTCAGTCGGAAGGTTGCTGGATGA 1365 0.4388 MERYKLIKEVGDGTFGSVWRAINKQTGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKEVIRESDILYFVFEYMECNLYQLMKDREKVFSEGEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVTKDIIKIADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSYMYSSKVDMWAMGAIMAELFSLRPLFPGASEADEIYKICGVIGSPTIESWADGLKLARDINYQFPQFAGVHLSGLIPSASDDAVSLIRSLCSWDPCKRPTAAEALQHPFFQSCFYIPPSLRTRAVSRTPPSAGTRGALDQQGVRRYSGALPNSKLTNNFSSPKLHPPLASGVQRKLDLVNQNGNKNEKSMNTVVKQSKYRQPGKDSPTSMNKGRNARAISETTDRLANMNVGSGTRRHSIAQPRPPPMKAGVNWISESGNFMLRPAQPIPTGRTFSRKVAG 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181246g00002 454 FunFam serine/threonine-protein kinase MAK isoform X1 84 293 - -
Stsc181246g00002 454 MobiDBLite consensus disorder prediction 321 343 - -
Stsc181246g00002 454 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181246g00002 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Stsc181246g00002 454 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181246g00002 454 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Stsc181246g00002 454 Gene3D Transferase(Phosphotransferase) domain 1 83 288 - -
Stsc181246g00002 454 FunFam cyclin-dependent kinase F-4-like 1 83 - -
Stsc181246g00002 454 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 350 - -
Stsc181246g00002 454 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181246g00002 454 CDD STKc_MAK_like 4 283 - -
Stsc181246g00002 454 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Stsc181246g00002 454 MobiDBLite consensus disorder prediction 355 420 - -
Stsc181246g00002 454 MobiDBLite consensus disorder prediction 355 410 - -
Stsc181246g00002 454 MobiDBLite consensus disorder prediction 321 337 - -
Stsc181246g00002 454 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181246g00002 Stsc-Chr181246 7518 11736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181246g00002 1 290 Core Cell Cycle Gene Families AT3G48750 38.255 8.89e-68 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Stsc181246g00002 Pkinase 7.4e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181246g00002 K08829 - gmx:100810150 822.772