Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc180g00005 ATGGAAAAAGCAACATTGAAGAGCTCAAGCACTCAGGCCAAAATAATAGGTTCAGTTGTATCAATCATTGGTGCACTTGTAGTAACACTCTACAAAGGCCCAACAGTGTTACCTGCTTCATCCACTTTGTCTCCACCACTGAGCTCATCATCATCATCACAAGGAGATTGGGTTCTTGGAGGCTTCTTACTTGCTGCTTCATATACTTTACCTCCACTTTGGTATATTGTACAGACGCAAGTTATGGAACAATATCCGGTAGAACTTGTTGTGGTGTTTCTATACAACTTGTGTGGGACTCTTATATCTGTGCCAGCAGCATGCTTGCTTCTTGAATCAAGCTTCAGCTTTTGGAGGCTGAAACCTGACATAACATTAGTGGCGGTTATATTCTCAGGATTTTGTGGGACCTTGGTGAGTGTGGTTCATACATGGGGAGTACATCTTAAAGGCCCTGTGTATGTATCAGCTTTCAAGCCACTATCTGTTGTCATAGCTGCTGCAATGAGTGTCGTGTTCCTTGGTGATGCTTTGTTTCTTGGAAGTGTTATTGGAGCAGGGATACTATCAATTGGGTTTCATGCTGTTTTATGGGGAAAAGCAAAATCAACAGCAGAATTGAGTGAAGAGTATTGCTTGAATAGAAAGCTTTCTACATGCAACAGCACAACTCCTTTATTGCGTAGTAAACAAAGAAAGCAGAGTTATCCTATATAA 717 0.4128 MEKATLKSSSTQAKIIGSVVSIIGALVVTLYKGPTVLPASSTLSPPLSSSSSSQGDWVLGGFLLAASYTLPPLWYIVQTQVMEQYPVELVVVFLYNLCGTLISVPAACLLLESSFSFWRLKPDITLVAVIFSGFCGTLVSVVHTWGVHLKGPVYVSAFKPLSVVIAAAMSVVFLGDALFLGSVIGAGILSIGFHAVLWGKAKSTAELSEEYCLNRKLSTCNSTTPLLRSKQRKQSYPI 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc180g00005 238 PANTHER WAT1-RELATED PROTEIN 1 204 IPR030184 GO:0016020|GO:0022857
Stsc180g00005 238 SUPERFAMILY Multidrug resistance efflux transporter EmrE 104 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc180g00005 Stsc-Chr180 35139 43769 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc180g00005 1 203 Nodulin-like Gene Family AT5G40240 57.547 5.15e-75 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc180g00005 - - aip:107605316 281.567