Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc180g00002 ATGGCGGAGTCAAGAGCAGGGAGGTATTATTGTTACAGGGAAGTGCTTCCATTCTGTGCAATGGTTGCAGTTGAGTGCACCAACGTCGGTGTCAACGTTCTATTCAAACAAGCCACTCTCCAGGGATTGAGTTACTATGCTTTCATCGTTTATTCTTTCGCTGTCTCCTCTCTTTTTCTTCTTTTGCCTCTTCCCTTCGTCCTCAGATGGTCAAGAGGGCTTCCTCCATTCACGGTTTCTCTGATCTTAAGAATTTTTCTCCTTGGTACGATTGGATTTGTAGCTCAGCTGAGTGGATACAAAGGACTTGAATACACTTCACCAACTCTCTTCTCTGCTCTTAGCAACCTTATTCCGGCTTTTACCTTCATCCTTGCCGTATTTTTCAGGATGGAGAAGATTTCTCCAAAAAGTTCGAGCACTCAGGCCAAAGTGTTGGGTTCTTTAGTATCAATATTAGGTGCACTCATAGTTGTTCTTTACAAGGGTCCAACATTATTCTCAGGTTCATCATCTAATGTTGATTCTCTAAAGGACTCATCATCCCAGCAAAATTGGGTTCTTGGAGGGTTTCTTATTGCCATTGAGTTCATTCTTGTTCCAATTTGGTACATTGTTCAGACGAATGTAATCAAGGAGTATCCAGCAGAGATTATTGTGGTGTTCTTGTACAACTTGTGTGGGACTCTCATATCTGCACCAGTGTGCTTACTGTTAGAAGAATCAAACTTAAGTGGTTGGAGGATTAAGCCTGATATAACATTAATCTCGATTTTATACTCTGGATTCTTTGTGACAGGTCTAAGCAGTTTGGTCCACACATGGGGTATCCATATCAAAGGCCCTGTATATATATCAAGTTTTAAGCCTGTGTCTATAGCCATAGCTGCAGCTTTCAGTGCTATATTTCTTGGTGATCCACTATATTTGGGGATTGTTGTGGGAGGAGTAATAATATCAATTGGGTTTTACTCTATTATATGGGGTAAAGCAAAAGAAGAATTGAGTGAGTGCAGTTCAAGCCAAACTCAACCTGCATCCAAGTCCCATCCTTTGTTGGAGAGCTACAATGTGAAAGATAGTAGTGAAACAAGTTGTAATGATTGTTGA 1110 0.4081 MAESRAGRYYCYREVLPFCAMVAVECTNVGVNVLFKQATLQGLSYYAFIVYSFAVSSLFLLLPLPFVLRWSRGLPPFTVSLILRIFLLGTIGFVAQLSGYKGLEYTSPTLFSALSNLIPAFTFILAVFFRMEKISPKSSSTQAKVLGSLVSILGALIVVLYKGPTLFSGSSSNVDSLKDSSSQQNWVLGGFLIAIEFILVPIWYIVQTNVIKEYPAEIIVVFLYNLCGTLISAPVCLLLEESNLSGWRIKPDITLISILYSGFFVTGLSSLVHTWGIHIKGPVYISSFKPVSIAIAAAFSAIFLGDPLYLGIVVGGVIISIGFYSIIWGKAKEELSECSSSQTQPASKSHPLLESYNVKDSSETSCNDC 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc180g00002 369 PANTHER WAT1-RELATED PROTEIN 16 341 IPR030184 GO:0016020|GO:0022857
Stsc180g00002 369 MobiDBLite consensus disorder prediction 339 369 - -
Stsc180g00002 369 Pfam EamA-like transporter family 29 159 IPR000620 GO:0016020
Stsc180g00002 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Stsc180g00002 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 224 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc180g00002 Stsc-Chr180 17472 25776 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc180g00002 3 362 Nodulin-like Gene Family AT5G40240 52.186 4.94e-130 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc180g00002 - - gmx:100805667 463.766