Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc17g00036 ATGACTACCATCCGCCGCTTTTGCTGCAACGATCTCCTTCGCTTTGCCTCCGTCAACCTCGACCATCTCACTGAGACTTTCAATATGTCTTTCTACATGACCTATCTCGCCAGATGGCCTGACTATTTTCATGTTGCCGAAGGCCCCGGAAACAGAATCATGGGTTACATTATGGGTAAAGTAGAGGGGCAAGGAGAATCTTGGCATGGGCATGTAACTGCAGTAACCGTTGCTCCCGAGTATCGGCGGCAGCAATTAGCCAAGAAACTGATGAATTTGCTAGAAGACATCAGCGACAACATTGACAAGGCTTACTTTGTTGATCTTTTTGTGAGAGCGTCAAATGCACCAGCCATCAAGATGTATGAAAAGCTTGGCTATGTGATTTATCGACGAGTGCTACGTTACTATTCTGGGGAAGAAGATGGATTAGATATGCGGAAGGCATTGTCTCGTGATGTTGAAAAGAAGTCAATCATTCCTCTTAAACGACCTATCACTCCGGATGAATTAGAATAG 519 0.4509 MTTIRRFCCNDLLRFASVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVAPEYRRQQLAKKLMNLLEDISDNIDKAYFVDLFVRASNAPAIKMYEKLGYVIYRRVLRYYSGEEDGLDMRKALSRDVEKKSIIPLKRPITPDELE 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc17g00036 172 Pfam Acetyltransferase (GNAT) family 39 127 IPR000182 GO:0016747
Stsc17g00036 172 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 1 171 - -
Stsc17g00036 172 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 151 IPR000182 GO:0016747
Stsc17g00036 172 CDD NAT_SF 45 97 - -
Stsc17g00036 172 Gene3D - 2 161 - -
Stsc17g00036 172 FunFam N-alpha-acetyltransferase 20 2 161 - -
Stsc17g00036 172 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 150 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc17g00036 Stsc-Chr17 190714 194233 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc17g00036 Acetyltransf_1 7.9e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc17g00036 K17972 - gmx:100306394 350.903