Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc17g00029 ATGGGAAGAACGAGAAGGAACAAGCTCACACACTTGGACCTATGCTTCTCAAATTTCATGGGCTCTTTCATTCATGATGATGATGATCATCATCAATCTTCTAATAATAATAATTTGCCACCACCATCCCATCACAACCGTCCATCATCATCATCAACCTCGATTATCAAGAACTTCAACACTCTCTATGACACCACCACCACGGAATCCCAACAACCCCAACCTCAACCTCCAGACTTCGCCACCGCATTCGCTTCTCAACGCTTCTTCTTCTCCTCCCCCGGCCGATCCAACTCCATCCTCGAATCTACCCCGTCCTCTTCCTCCTCTTCATCACTAACTTCCTCGCTAACCACCACTACGCTGCGGGAAGCTTCCTCTGCTTCCGCCGCTGGAGAAGAAACTAATAATAAGGCGGTGTTGTTTGAGGGGAGCGTGGCGGTGCCGACGTACTCGCCGAATCCTTACTTGGACTTCCGGCAATCAATGGAGGAGATGGTGGAAGCTCGACCGGAGGTGATGGCAGACGTGAAGTCCAATTGGCACGTGCTGCAGGAGCTTCTGATGTGTTACCTGGCGCTGAACCCGAAGAGCACTCACAAGTTCATTCTGGGTGCCTTCGCTGATCTTGTGGTTACACGTATGGCATCTTCTGCTTCGTCTTCTTCTTTATCTTCTAGTTGTTGTCCAGCGGTGCATGGCGGTGACGGTGACGGTGGCGGCGGAGAATGTTAG 735 0.5102 MGRTRRNKLTHLDLCFSNFMGSFIHDDDDHHQSSNNNNLPPPSHHNRPSSSSTSIIKNFNTLYDTTTTESQQPQPQPPDFATAFASQRFFFSSPGRSNSILESTPSSSSSSSLTSSLTTTTLREASSASAAGEETNNKAVLFEGSVAVPTYSPNPYLDFRQSMEEMVEARPEVMADVKSNWHVLQELLMCYLALNPKSTHKFILGAFADLVVTRMASSASSSSLSSSCCPAVHGGDGDGGGGEC 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc17g00029 244 Pfam Transcriptional repressor, ovate 152 213 IPR006458 -
Stsc17g00029 244 NCBIfam uncharacterized plant-specific domain TIGR01568 146 212 IPR006458 -
Stsc17g00029 244 MobiDBLite consensus disorder prediction 27 54 - -
Stsc17g00029 244 ProSiteProfiles OVATE domain profile. 148 213 IPR006458 -
Stsc17g00029 244 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 51 215 IPR038933 GO:0045892
Stsc17g00029 244 MobiDBLite consensus disorder prediction 34 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc17g00029 Stsc-Chr17 158745 159501 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Stsc17g00029 Ovate 1.5e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc17g00029 - - gmx:102660213 170.629