Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc17g00018 ATGGCGGGAAACATAGAGTATGGCAAGGAGTGTCCAAATGGAGTGGCCATTCCGCCGCCGCAACCGTTCATAAAGTCGTTAAAGTACTCATTGAAGGAGACCTTCTTCCCGGATGACCCGCTCAGACAGTTCAAGAACCAGGCTGCCTCAAGGAAGCTAGTGTTGGCACTGCAATACTTCCTGCCCATATGCGAGTGGGGACCACGCTACACTCTCAAGTTCTTGAAATCGGACGTTATTTCTGGCATCACCATCGCCAGTTTGGCAATTCCTCAAGGCATCAGTTATGCCAAGCTCGCCAACCTCCCTCCTATTCTTGGACTCTATTCCAGCTTTATACCGCCATTGATATATGCCATGATGGGTAGCTCTAGGGATTTGGCCGTCGGCACGGTGGCTGTTGGGTCACTTCTCATGGCCTCCATGCTGGGTAAGGAGGTTAATTACATCCATAACCCGCAGCTTTATCTACACCTGGCTTTCACTGCCACTTTCTTCGCTGGTCTCTTCCAAGCTTCACTCGGTCTATTTAGGTTAGGGTTTATAGTGGACTTTCTGTCACATGCAAGCATAGTAGGGTTCATGGGTGGAGCAGCAACAGTGGTATGCCTGCAGCAGCTGAAATCAATTCTGGGACTTAACCATTTCACACACCACGCTGATCTTGTCTCCGTCATGCGTTCTGTTTTCTCCCAAACCCACCAGTGGAGGTGGGAAAGCGCATTGCTAGGATGCTGCTTCATTTTCTTCCTTCTCATCACGAGATACTTCAGCAAACAAAAACCAAAGCTGTTTTGGGTGTCAGCAATGGCGCCATTGACATCTGTAATATTGGGAAGTCTGCTTGTTTATTTCACTCACGCCGAGAAGCATGGCGTTCAAGTGATAGGAGAATTGAAGAAGGGGCTAAATCCACCATCCGTGACAGATTTGGTGTTTGTGTCACCTTATATGACCACTGCCATCAAAACTGGCATTATCACCGGCGTTATAGCCCTTGCTGAAGGAATAGCAGTGGGAAGAAGCTTTGCAATGTTTAAGAATTACCATATCGATGGAAACAAAGAGATGATAGCTATTGGCACCATGAACATTGTTGGTTCATTCACCTCTTGCTACCTTGCAACAGGTCCATTTTCTCGTTCTGCTGTCAACTACAATGCTGGCTGCAAGACTGCAGCATCAAACATAGTAATGGCAATAGCAGTCATGTTGACATTGTTATTCCTAACACCATTGTTCCATTACACTCCCCTGGTTGTACTGTCAGCCATCATTGTTTCTGCCATGCTCGGCCTCATTGATTATGAAGCAGCAATCCACCTCTGGAAAATCGACAAATTCGATTTCTTAGTCTGCATAAGTGCATATATTGGTGTCGTCTTTGGAAGTGTCGAAATTGGCTTAGTCATAGCAGTTGCAATATCTGTACTTCGTGTACTATTATTTGTTGCAAGGCCAAGGACATTTGTTTTAGGTAACATTCCAAATACTGGAGCATATAGAAATGTGGAACAATATCCCAATGCAAAACACATTCCTGGAATGCTAATTCTTGAAATTGATGCACCAATTTACTTTACCAATGCAAGCTATTTAAGAGAGAGGATCACAAGGTGGATTGATGAAGAGGAAGACAGAATCAAAGCTTCAGGGCTGAACAGTTTGCAGTATGTGATATTGGATATGACTGCGGTTGGAAACATTGATACAAGTGGAATAAGTATGCTTGAAGAGGTCAAAAAGATTGTTGACAGAAGAGGACTCCAACTGGTTTTGGTGAATCCTGGAAGCGAGGTGATGAAGAAACTGAATAAAGCAAAGTTTCTTGATGAAATAGGGCAGAGGTGGGTGTACCTAACAGTTGAAGAGGCTGTTGCAGCATGCAACTTCATGCTCCATACATATCAACCAAATCCCAAGAAAGATGAATCAGGAGGATGGAACAATGTGTGA 1956 0.4463 MAGNIEYGKECPNGVAIPPPQPFIKSLKYSLKETFFPDDPLRQFKNQAASRKLVLALQYFLPICEWGPRYTLKFLKSDVISGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMASMLGKEVNYIHNPQLYLHLAFTATFFAGLFQASLGLFRLGFIVDFLSHASIVGFMGGAATVVCLQQLKSILGLNHFTHHADLVSVMRSVFSQTHQWRWESALLGCCFIFFLLITRYFSKQKPKLFWVSAMAPLTSVILGSLLVYFTHAEKHGVQVIGELKKGLNPPSVTDLVFVSPYMTTAIKTGIITGVIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNIVGSFTSCYLATGPFSRSAVNYNAGCKTAASNIVMAIAVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLIDYEAAIHLWKIDKFDFLVCISAYIGVVFGSVEIGLVIAVAISVLRVLLFVARPRTFVLGNIPNTGAYRNVEQYPNAKHIPGMLILEIDAPIYFTNASYLRERITRWIDEEEDRIKASGLNSLQYVILDMTAVGNIDTSGISMLEEVKKIVDRRGLQLVLVNPGSEVMKKLNKAKFLDEIGQRWVYLTVEEAVAACNFMLHTYQPNPKKDESGGWNNV 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc17g00018 651 Gene3D STAS domain 486 631 IPR036513 -
Stsc17g00018 651 PANTHER SULFATE TRANSPORTER 25 632 IPR001902 GO:0016020|GO:0055085
Stsc17g00018 651 ProSitePatterns SLC26A transporters signature. 104 125 IPR018045 GO:0008271|GO:0008272
Stsc17g00018 651 Pfam Sulfate permease family 75 455 IPR011547 GO:0016020
Stsc17g00018 651 SUPERFAMILY SpoIIaa-like 508 629 IPR036513 -
Stsc17g00018 651 CDD STAS_SulP_like_sulfate_transporter 507 622 - -
Stsc17g00018 651 NCBIfam sulfate permease 62 625 IPR001902 GO:0016020|GO:0055085
Stsc17g00018 651 ProSiteProfiles STAS domain profile. 506 629 IPR002645 -
Stsc17g00018 651 Pfam STAS domain 507 625 IPR002645 -
Stsc17g00018 651 FunFam Sulfate transporter 31 486 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc17g00018 Stsc-Chr17 105352 110402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc17g00018 15 651 Inorganic Solute Cotransporters AT4G02700 70.063 0.0 923
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc17g00018 K17471 - gmx:100791091 1129.01