Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc179g00007 ATGGCTGCAACACTCTCACTCTCCCTCTCCTTAGACCCCCAAATCCACCACCGATTCCCCTTCCCCAAACACCACACGCGCCCTTTCTCATACCCACACCTTAATTTCCACATTTACCCCTCACACTCCTTCAAAATCTCATCCTCCACCCCTTCCCATTCCCATTCTCACTCCTCAACAGCATCACCACCACCGCCACCACAACCCCCAGTCTCCTCTCTCTACCTCGACGACCCCTTCCGCACAGGTCGCTTCCTCACCAACGACGAGCTCGACCGCCTCCGCTTCCTGGAATCCTTCGTCTACTCCGAGGACCTCAAATCCGGCTCCATGTGGGTCCGCGTCATGCGCCCCGACGAGACCGACACCACCGTCGCTCTCCTCGCCGATTCCTTCGCCGAGTCAATGATGCTCCCCGCGGGCTACGCCGGCCTCCTCAGGTTCCTCATCAAGAAGTACCTCCTCGAGAGGAGAACCCTCATGCCTCACATGGCCACACTCCTTGGATTCTACAGAGAACATTCTACGACTAATCAAGGAGAACAAGAAGTTAAATTCGCCGGAACAGTGGAGGTTTGTTTTGACCAAAGAGGTGCCAACACTTCTGTCCCTTCGCCGCTTCCTCCGAGGAACTCGCCTTATATATGCAACATGGCGGTTCACAAGTCCCTTCGGAGGAGAGGCATTGGGTGGCATCTGCTGAAGGCAAGTGAGGAACTAATTTCTAAGATGAGTTCTTCAAGAGAGGTTTACTTGCACTGCAGAATGATTGATGAAGCTCCATTTAGCATGTATGAAAAAGCAAATTACAAAGTTGTAAAAACAGATAGTATTTTAGTCCTGCTGATGTTGCAGAGACGAAAGCACTTGATGTGCAAAAAACTACCTCTGTCGAATATGCCTTCAGAAGCAGATCTGTCTGATTCAGATGAGTAA 936 0.5139 MAATLSLSLSLDPQIHHRFPFPKHHTRPFSYPHLNFHIYPSHSFKISSSTPSHSHSHSSTASPPPPPQPPVSSLYLDDPFRTGRFLTNDELDRLRFLESFVYSEDLKSGSMWVRVMRPDETDTTVALLADSFAESMMLPAGYAGLLRFLIKKYLLERRTLMPHMATLLGFYREHSTTNQGEQEVKFAGTVEVCFDQRGANTSVPSPLPPRNSPYICNMAVHKSLRRRGIGWHLLKASEELISKMSSSREVYLHCRMIDEAPFSMYEKANYKVVKTDSILVLLMLQRRKHLMCKKLPLSNMPSEADLSDSDE 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc179g00007 311 MobiDBLite consensus disorder prediction 47 73 - -
Stsc179g00007 311 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 111 280 IPR016181 -
Stsc179g00007 311 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 111 288 IPR000182 GO:0016747
Stsc179g00007 311 Pfam Acetyltransferase (GNAT) family 181 269 IPR000182 GO:0016747
Stsc179g00007 311 CDD NAT_SF 208 253 - -
Stsc179g00007 311 Gene3D - 164 304 - -
Stsc179g00007 311 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 2 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc179g00007 Stsc-Chr179 69655 71742 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc179g00007 Acetyltransf_1 8.1e-06 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc179g00007 - - qsu:112018570 364.385