Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc178g00016 ATGGCTGCAGAACTGTTGGGAGGAGCTGCCATTGGAGCTGCCTTCGGAGAATTGCTGAAGGCGGTTATGGAAGTTAAGGACAAAGCCAGCAATTTCAAGAACACCTTGGCATACCTGCGAACCATTTTGGTGAAGATAGATCCTCTGATCAAGGAGATGGAGCAACAGAACTGCGAATTAGGGCGTTCGAAGGAAGAGCTGGGTTCGCTGATTGAAGAGATGGAAGAAGGGAGAAAGCTTGTTTACAAGTGTTGTAAGATCCACAGGCTGAATTTCCTTGGCAGGATTCAGTACCAAGATGACCTTGCCAAATTGGTGGTGAATTTGGAAGGGTTCTTTAGGTTTGATGTGCCAGCTCAGACTTCAAGAGATACCAAAGAGACCTTGCTCAAAGTCACAAGGATACTTAGTGCAGTTAGAAAGATTCCTTTAGTTAGAACTCAAAGTGCAACTGCTTCTGCTTCTGATTCTGATTTTGACTCCATGCCTCTGCAGCAGAATGATGAAATTGAGAGCCTTGCTAAGCCTGTCTTGGAAGACATTGCCTCCCTTGTGCACAAGAGTAGCCAAGCAGAGGCAAAAGTACATAAAGGGTATCAAGACCTACATAACAAGCATGAAGCCAGTGGGAGGCTGAGGAGCAGCATTCATTTTTTTGGCAGTAAAATGGGATTCACAGTTAATGATGAAATTAATTTGATTTCTGAAGATATTTCTAAACTAGAAGATGAGTTTAAGCTGATATTATCATTTTTCAGCAAGCCTGTGGAACCTAAGCACCTCTTTGATTTCCTTGAAAACTCAATGCGGCCTTCGTCGGGATCTCCTGGCCATGAGGGTGATCCTAGTGGAGGGACACCTTCTTCCTCTTGTCATCATTCTGAGTCCACTCCTCTCAATCTTATACCATCAAGAATTGTGTCACAGCTACATTACGTAGCTCAGCAGCTGGTTGAAGCTGGGCAACAACAACAGTTACTGAATATCTATAGAGATGTCCGTTCTAATTGGTTGGAAGAAAGCATCCAAAAATTTGGGGTTGAGAAACTCAACAATGCTCAAAAGTTGCAGTGGGAGTTATTGGAAGCCAAAATTGGAAGCTGGATCCATTTAATGCCTATAGCCGCCAAGCTGTTTGCTAGTGAGAGGGAAGCTTGTAATCTGATATTTGAAGGCTTCGATTCGCTCGCTGAACAGTGCTTTGCTGAGGTGACTACAAACAGCATCTCCATGCTACTTAGTGTTGGAGAAGCAAATGCCAAAATCTTGAGATCCCCACAAAGCTTCCATCTACTTTTAGACATGTATGAAACAATGCTAGAGCTCCATTTAGAGATTGAAACACTCTTTAGAGGCAAAGCTTGCACAGAAATAAGAGAAGCAGCAATTGGTTTTACAAAACAACTTGCACTGATGTCCAAAGAGGTCTTTGGAGATTTGGAGGAAGTAATTGAAAAAGATGCTATGGAGACTGCAGTAACAGATGGAATCCATCCTTTAACAAGCAATATACTTAACTTTGTGAGGGTTTTAAACAACTACGAGTCGACATTGAAGCAACTGTTCCAAGAAGTTGAAGGTGGAGACTATTCTTCGCAGCAGGCATCCGTAACAAAGCGAATAATTCAGGCTTTGCAATCCAAATTAGATTTGAAATCAGAGAAGTATAGAGACCCTGCATTTAAGCATCTTTTTCTCATGAACAATATTTATCATATTGTTAAATTTGTTCAGAGCTCTGAAGCCAAGGATATATTAGGGGATGATTGGGTAAGAGTACATAGTGGAATTGTGCAGCACCATGCTAATCAATACATAAGAAATACTTGGGCTAAGACTCTGACATGCATATCTGCAAAAGGCGTATATAAAGAAAGAGGTGTTTTTGGCATGAGTGGTGTTAGCAGAGCAATTCTTAAAGACAGTTTGAAGACATTCAATGATATGTTTGAGGAACTCCATCGGAAACAATGTGAATGGAGAGTTCCTGACAGGGAGTTGCGGGAGTCTTTACAGCTCGCGATTACTACAATCGTGTTAGCCGCATATAGAACATTTGTGAGACGATTCGGGCCTCTTGTGGAAAGTGGAAAGAGTCGTGACAAGTACATCAAGTACACGAGTGAAGATGTAGAGAGAATGTTGGGCGAATTCTTCCATGGGAACATCATCAACCAAACCACACGCTGA 2190 0.4205 MAAELLGGAAIGAAFGELLKAVMEVKDKASNFKNTLAYLRTILVKIDPLIKEMEQQNCELGRSKEELGSLIEEMEEGRKLVYKCCKIHRLNFLGRIQYQDDLAKLVVNLEGFFRFDVPAQTSRDTKETLLKVTRILSAVRKIPLVRTQSATASASDSDFDSMPLQQNDEIESLAKPVLEDIASLVHKSSQAEAKVHKGYQDLHNKHEASGRLRSSIHFFGSKMGFTVNDEINLISEDISKLEDEFKLILSFFSKPVEPKHLFDFLENSMRPSSGSPGHEGDPSGGTPSSSCHHSESTPLNLIPSRIVSQLHYVAQQLVEAGQQQQLLNIYRDVRSNWLEESIQKFGVEKLNNAQKLQWELLEAKIGSWIHLMPIAAKLFASEREACNLIFEGFDSLAEQCFAEVTTNSISMLLSVGEANAKILRSPQSFHLLLDMYETMLELHLEIETLFRGKACTEIREAAIGFTKQLALMSKEVFGDLEEVIEKDAMETAVTDGIHPLTSNILNFVRVLNNYESTLKQLFQEVEGGDYSSQQASVTKRIIQALQSKLDLKSEKYRDPAFKHLFLMNNIYHIVKFVQSSEAKDILGDDWVRVHSGIVQHHANQYIRNTWAKTLTCISAKGVYKERGVFGMSGVSRAILKDSLKTFNDMFEELHRKQCEWRVPDRELRESLQLAITTIVLAAYRTFVRRFGPLVESGKSRDKYIKYTSEDVERMLGEFFHGNIINQTTR 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc178g00016 729 MobiDBLite consensus disorder prediction 267 296 - -
Stsc178g00016 729 SUPERFAMILY Cullin repeat-like 181 720 IPR016159 -
Stsc178g00016 729 Gene3D Exocyst complex component Exo70 181 729 - -
Stsc178g00016 729 PANTHER EXOCYST COMPLEX PROTEIN EXO70 169 721 IPR004140 GO:0000145|GO:0006887
Stsc178g00016 729 Pfam Exo70 exocyst complex subunit 368 716 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc178g00016 729 MobiDBLite consensus disorder prediction 282 296 - -
Stsc178g00016 729 Coils Coil 53 73 - -
Stsc178g00016 729 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 3 133 IPR008808 -
Stsc178g00016 729 ProSiteProfiles RPW8 domain profile. 1 151 IPR008808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc178g00016 Stsc-Chr178 66947 71109 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc178g00016 190 729 EXO70 exocyst subunit family AT5G03540 52.668 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc178g00016 K07195 - adu:107466547 1093.95