Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc178g00015 ATGGCGGCAGAATTGCTGGCTGGAGCTGGCCTTGGAGCGGTGTTCGGAGAATTGCTTTCAGCAGTTCTGAAAGCTGGGAAGAAGGCCGTCCATTTCAATAATACCTTGGAATACCTGAGAAGCATTTTGATTAGGATAGATCCTTTGATTAAGGAGATGGAGAAACAGAACCATGAACTTGACCTACCAAAGGAAGAACTGAATTCGCTGATTGAAGAGATGAAACGTGGGACAAATCTTGTTCACAAGTGTTCCAAGGTGAACATGTTTAATTACTATGCAAAGTCGCGGTACGAAAAAGAACTCGCCAATTTGGTGGAGTGTCTGGAAAGTTTCTTCAAGTTCGATGTGCCAGCTCAGACTTCTAGAGATACCAAAGAGACCTTGTTCAAAGTCACAAGAATCCTTAGTGCTATTGAGAAGCAGCAGCATCATCATTCCTTTGCTGCTACAAATTCTTCTTCTTCTTCTGGTTCTGATGACTCTTCTGTGCATCTGGAATCAGATAATAATGTTTCTGATGATGATGAAAATGATAAGAGGGAAGAAGAAGCTCATGATGAATTGGTGGTGGAGACTCTTGCTATGCCTCTCTTGGATGATATTGCCACCCTTGTGCACAAGGTTAGCCAAGGACAGGTACATAGTAGTGGAGATGAAGAATTTCAAAACAAGCAAGAAAAAAGTGACAGACTGAGGAGCAGCATTCAGTATTTTGGCACTAAAATGGGATTTAAAGTTAGTGATGATAGTGATGAAATTGTATCTGAGGGAAATAATTTGATTGCTCAAGATATTTCTAAACTCGAAGATGGCTTTAAGCTGATATTGTCATTTTTTAGCAAGCCTGTGGAACCAAAGAGCCTCTTTGATTGGCTTAGAAACTCAATGGGACATGAAGAAGATGATCCTTTGTCTTCTCATCATGAGTCTACTCCTCTCAATATTATACCATCCAGAATTGTTTCACTTCTACATTACTTAGCTCAGCTGCTGCTTGAAGCTGGTCATCAACAACAGCTACTAAATATCTATAGAGATGTTCGTTCTAATTGGTTAGAAGAAAGCATCAAAAAATTTGGGGTTGAGAAACTCAACAATGATGATGCCCAAAAGTTGCAGTTTGAGATACTGGAAGCCAAAAATGGAAGCTGGATCCATTTAATGCCCATAGCCGTGAAGCTGTTTGATAGCGAGAAGAAAGTTTGTAATCTGATATTTGAAGGCTTTGATTCAGTCGCTGAAGAGTGTTTTGCAGAGGTGACTGCAAACAACATCTCCATGCTACTTAGTATTGGAGAAGCAAATGCCAAAATCGTAGTTAAATCTTCCAGAAACTTCCATTCACTTCTACACATTTATGAAACAATGCTAGAGCTCCATTTAGAGATTGAAACACTTTTTGGAGGCACAGCTTGCACTGGAATAAGAGAAGCAATAATTGGCTTTACAAAACGACTGGCAAAAATGGCCAATGAGGTTGTCTTTGGAGATTTTGATGAGATAATAGACTCTTCAGCAATAGTAACAGATGGAGTTCATCCTTTAACAAGCTATATGATTAACTTTGTGAGGGTTTTATATGACTGCCAGTCCATCCTGAAGAAATTCCAAGAATTTGAAGGTGGAGAGTATTCATCTGAAATAAAGCAAATAATGCAGGAATTGCAATCCAAATTAGATTTGAAATCAGAGCAGTATAGAGACGACCCTGCATTTAAGCATCTTTTTCTCATGAACAATATTTATTATATTGTTAAATTTGTCCAGAGCTTTGAAGCGAAGGAAATATTAGGGAATGATTGGGTAAGAGTACATGTTGGAATTGTGCAGTACCATGCAAAACAATACATAAGAAATGGTTGGGCTGAGAGTCTGAGATGCATATCTGAAGAAGGCATATATAGACGTGTTTTTGGCATGAGCACTGGTGTTAGCAGAGCAATTCTTAAAGACAGGTTGAGGACATTCAATGATATGTTTGAGAAACTCCATCAGAAACAAAGTGAATGGAGAGTTCCTGACCCAGAGCTGCGAGAGTCTCTACAGCTATCTGTTGCTGTAATAGTGTTACCCGCCTATAGATCATTTGTCAACCGATTCGGGCCTCTGCTGGAAAGTGGAAAGACTCTTAACAGGTACATCAAGTACACACCCGAAGATCTAGAGGGAATGTTGGCTCAATTTTTCCAGGGAGACAACGTAGAGCAGACCAATCCAATCCAACCATGTTCGGATTAA 2241 0.3963 MAAELLAGAGLGAVFGELLSAVLKAGKKAVHFNNTLEYLRSILIRIDPLIKEMEKQNHELDLPKEELNSLIEEMKRGTNLVHKCSKVNMFNYYAKSRYEKELANLVECLESFFKFDVPAQTSRDTKETLFKVTRILSAIEKQQHHHSFAATNSSSSSGSDDSSVHLESDNNVSDDDENDKREEEAHDELVVETLAMPLLDDIATLVHKVSQGQVHSSGDEEFQNKQEKSDRLRSSIQYFGTKMGFKVSDDSDEIVSEGNNLIAQDISKLEDGFKLILSFFSKPVEPKSLFDWLRNSMGHEEDDPLSSHHESTPLNIIPSRIVSLLHYLAQLLLEAGHQQQLLNIYRDVRSNWLEESIKKFGVEKLNNDDAQKLQFEILEAKNGSWIHLMPIAVKLFDSEKKVCNLIFEGFDSVAEECFAEVTANNISMLLSIGEANAKIVVKSSRNFHSLLHIYETMLELHLEIETLFGGTACTGIREAIIGFTKRLAKMANEVVFGDFDEIIDSSAIVTDGVHPLTSYMINFVRVLYDCQSILKKFQEFEGGEYSSEIKQIMQELQSKLDLKSEQYRDDPAFKHLFLMNNIYYIVKFVQSFEAKEILGNDWVRVHVGIVQYHAKQYIRNGWAESLRCISEEGIYRRVFGMSTGVSRAILKDRLRTFNDMFEKLHQKQSEWRVPDPELRESLQLSVAVIVLPAYRSFVNRFGPLLESGKTLNRYIKYTPEDLEGMLAQFFQGDNVEQTNPIQPCSD 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc178g00015 746 SUPERFAMILY Cullin repeat-like 230 730 IPR016159 -
Stsc178g00015 746 MobiDBLite consensus disorder prediction 146 166 - -
Stsc178g00015 746 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 3 133 IPR008808 -
Stsc178g00015 746 Gene3D Exocyst complex component Exo70 205 739 - -
Stsc178g00015 746 ProSiteProfiles RPW8 domain profile. 1 151 IPR008808 -
Stsc178g00015 746 Pfam Exo70 exocyst complex subunit 384 727 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc178g00015 746 PANTHER EXOCYST COMPLEX PROTEIN EXO70 199 732 IPR004140 GO:0000145|GO:0006887
Stsc178g00015 746 MobiDBLite consensus disorder prediction 146 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc178g00015 Stsc-Chr178 60264 65742 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc178g00015 231 737 EXO70 exocyst subunit family AT5G03540 48.221 9.64e-160 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc178g00015 K07195 - adu:107466547 885.945