Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc178g00014 ATGAGTTTGACAAAACGACTTGCACAAACAGCCCAAGAGACATTCGGGGATTTTGAAGAAGCTGTTGAGAAAGATGCTACAAAGACTGCAGTGACAGATGGAACTGTTCATCCTTTGACAAGCTATGTAATTAACTACGTCAAGTTTTTATTCGACTACCGGTCCACCTTGAAGCAACTTTTCCAAGAATTTGAAGGGGGAGATGACTCTTCGCAATTAGCATCTGTAACAATGCGAATAATGCAAGCTTTGCAAACAAATTTAGATGGGAAATCAAAGCAGTATAGGGATCCTGCCTTGACACATCTTTTTCTCATGAACAATATTCATTATATTGTCAGATCGGTTCGGAGGTCCGAAGCCAAGGATTTGCTGGGAGATGATTGGGTACAACGACATAGGAGGATTGTTCAGCAGCATGCAAATCAATACAAAAGAAATGCTTGGGCGAAGATTCTCCAGTGCCTATCTATTCAGGGCCTTACCTCATCAGGAGGCGGAAGTAGTACTGCTGGCGGTGATGGTGCAGCCGGAAGTAGTAGCGGTGCTTCACGAGCACTCGTTAAGGACAGGTTCAAGACATTTAACGTTATGTTCGAGGAACTCCATCAGAAACAATCTCAATGGACAGTTCCCGACACCGAGTTGCGGGAGTCTCTTAGGCTTGCAGTTGCTGAAGTCTTGTTACCAGCCTATAGATCATTTGTCAAACGATTCGGGCCTCTGGTGGAAAGTGGAAAGACACCTCAGAAGTACATCAAATACACGGCCGAAGATCTAGACCGGATGCTGGGCGAATTTTTCGAAGGGAAGAACATGAACGAAATGAAGCGGTAA 837 0.4456 MSLTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLKQLFQEFEGGDDSSQLASVTMRIMQALQTNLDGKSKQYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKILQCLSIQGLTSSGGGSSTAGGDGAAGSSSGASRALVKDRFKTFNVMFEELHQKQSQWTVPDTELRESLRLAVAEVLLPAYRSFVKRFGPLVESGKTPQKYIKYTAEDLDRMLGEFFEGKNMNEMKR 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc178g00014 278 PANTHER EXOCYST COMPLEX PROTEIN EXO70 3 270 IPR004140 GO:0000145|GO:0006887
Stsc178g00014 278 Gene3D Exocyst complex component Exo70 1 278 - -
Stsc178g00014 278 Pfam Exo70 exocyst complex subunit 2 265 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc178g00014 278 SUPERFAMILY Cullin repeat-like 2 269 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc178g00014 Stsc-Chr178 55279 57568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc178g00014 3 278 EXO70 exocyst subunit family AT5G03540 84.838 1.05e-160 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc178g00014 K07195 - gmx:100813987 491.886