Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1784g00002 ATGGACAATAACGACAAACCATCGAACGAGGAAGTTGGTAATTCTCAAGATTCAAGCTATGACTTTGATAGTAGTTCCGATGAAAGTGATGACATGGCGGGAGTGACCTCCGATGCGGCCGAAGCAAATGTAATCAACGTTGACGGTACAGAAAAGTTGATAACTGACCTGACCTCCGAAGATGTACGGGGGCTGACGTTCGATAGCGAATCCGAAGTTTGTGACTTTTATTCCAAATATGCAAAGTGTCATGGGTTTGTTTCTCGAAAAGACGTCAAGTCCGTAGATGCTAATGGCAACATAAATTCTAGACAACTAGTATGTAACAGAGCCGGAGTAAGACACTGGAAGCACTTTAAGAGGGAAAATCGGCAAAGGGAACATAAGCCGATTACTCGAGTCAATTGCCAGGCTAAGATTCGGTTTACTCGTCACCTAAGGTCGGGCAAGTGGAAAGTCATCGCCTTTGAGGGCAAGCACAACCATCCTTTATGCCCACTCAAGTTTAGGCATCTTATTCCGGCTAATCGTTGGCTTGACGATGCCGACAAAGCACAAGCAGATAGCATGCGAGCATTCGGTGTTAGAACATGCCACATAATGGGTTACATTGTGGCCCAAAAAGGTGGATTTGATAAAGCTGGTTTTACACACAAGGACCTACACAACCACATTGCCAGGACCAAACGCGGCAAGATAAAAGAAGGTGATGCATATGCTGCACTGGGTTATCTATCTTCTTTGTCTGACAATGATCCATTATTTTTCGGGAAGCTCACGTTGGATAATGGCAAGTTGGATAAGCTGGCGTGGGCTGACGGAGCAAGTATTGTGGATTACGAATGCTTTGGTGATGTGCTAGCTTTCGACACTACTTACAAGAAAAATGTGTAA 894 0.4463 MDNNDKPSNEEVGNSQDSSYDFDSSSDESDDMAGVTSDAAEANVINVDGTEKLITDLTSEDVRGLTFDSESEVCDFYSKYAKCHGFVSRKDVKSVDANGNINSRQLVCNRAGVRHWKHFKRENRQREHKPITRVNCQAKIRFTRHLRSGKWKVIAFEGKHNHPLCPLKFRHLIPANRWLDDADKAQADSMRAFGVRTCHIMGYIVAQKGGFDKAGFTHKDLHNHIARTKRGKIKEGDAYAALGYLSSLSDNDPLFFGKLTLDNGKLDKLAWADGASIVDYECFGDVLAFDTTYKKNV 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1784g00002 297 MobiDBLite consensus disorder prediction 8 22 - -
Stsc1784g00002 297 PANTHER OS01G0519700 PROTEIN 59 289 - -
Stsc1784g00002 297 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
Stsc1784g00002 297 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1784g00002 Stsc-Chr1784 8742 11912 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc1784g00002 FAR1 4.8e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1784g00002 - - ahf:112774240 437.958