Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc175g00007 ATGGATGAGTCAAATAAGGAAAAGGCCATCAGAGCCAAAGAAATTTCTGAGAAAATGTTTGGTGCAGGTGATGTTAATTCTGCAATGAGGTTTGCTTGTCAGGCTAGAAATCTGTTTCCTGACCTTGAGGGTATTGAGCAGATGATGAAAATATATGGTATGCACATGGCTGCTAAGAACAAAATAAATGGTGAAATACACTGGTACAATATGCTTGGTGTGGCTGCTCAAGATGATGTTGACACAATGAGGGAGGCGTATGTGAGTTTAGCTTCTCTGCTTCTTTCGGACAGTGACAAGTATGTTGGTGCAGATGGGGCCTTTGAACTTGCTTCGCAGGCGTGGAGTGTGCTGTCGGATAAGGCTAAGAGGGCGGCCTTCGACGAGAAGATTAATGCGCCGACATTCCATGAGGAGGTTAAGGCAGCAACATGTAAACTTGCAACTGAGTGTGAATATCCACCATCACAAGAGGGGGCTAATTGTGATCACAATGTTACTAAGTCTGCCACTTCAAATGCAAAGATTCAGAAGGAAAATTCGTCTGCATCAAGATCAATTACATTTTGGACTATCTGCCCTAGGTGCAAGATTAGGTTCCTGTACCCTAGAGTTATTGTTAACTGTAGACTTTCGTGTTACGTTTGCAATGAAGAATTTATAGCTGTAGAAGTAGATAGACGGAAGATTTTAGGAACAAGGAGGCATTCCAGGGATTTGCATGGTATCAATCCGCAGGCAAATGATGTAAGCAACCTTCATCGCAGTACATTACCGAGAAAAACTCGTCAGTTTTCCTCTGCAACTCAAGCAAAAGATGATCAAAAGATGTATCAGAAAGTGAAGCGAAAGCGAAATGAGGAGCAAGTCACAAAGAGGGAGAATGCCTTACAAGAGGAGCACCCTGTTGCTAAAAAAGGTTACTTTAATCCTACTAAGATAAGAAGTGCCTTGGAGGATATGAGCTTGACCGGCTATGGCGAGCGAAACACAAATGAGCCAAATTCTGAATATAATGAGGTAAGTCAAGCTAAAGAGAGCTGCATTGTAAAAGGCATCTACCAGGCTGAGCTTCATAACCATCTTATGGACATTGCTGTGAATGCGCTTAGTACGAAACTAGCAGCACTTAGTCCAGATTCTAAAGATAGCCAGAAAGTAAACGAGACAGGGGAAACATTTTTAAAGGAATCTGATAGTTGTGATCAAGATAATTGTGAGAAGCCAGAAGAAGAAAGAACAAGTGTACCTCAAGCAACCATGCCATCTGCAGGCTCTAACACTACAACTCACATGCTAACAAAATCTTTGGGGAAGATGTCAATAGAGTTTCCAACTTCCAAATGA 1347 0.4195 MDESNKEKAIRAKEISEKMFGAGDVNSAMRFACQARNLFPDLEGIEQMMKIYGMHMAAKNKINGEIHWYNMLGVAAQDDVDTMREAYVSLASLLLSDSDKYVGADGAFELASQAWSVLSDKAKRAAFDEKINAPTFHEEVKAATCKLATECEYPPSQEGANCDHNVTKSATSNAKIQKENSSASRSITFWTICPRCKIRFLYPRVIVNCRLSCYVCNEEFIAVEVDRRKILGTRRHSRDLHGINPQANDVSNLHRSTLPRKTRQFSSATQAKDDQKMYQKVKRKRNEEQVTKRENALQEEHPVAKKGYFNPTKIRSALEDMSLTGYGERNTNEPNSEYNEVSQAKESCIVKGIYQAELHNHLMDIAVNALSTKLAALSPDSKDSQKVNETGETFLKESDSCDQDNCEKPEEERTSVPQATMPSAGSNTTTHMLTKSLGKMSIEFPTSK 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc175g00007 448 MobiDBLite consensus disorder prediction 280 301 - -
Stsc175g00007 448 Gene3D DnaJ domain 66 133 IPR036869 -
Stsc175g00007 448 MobiDBLite consensus disorder prediction 378 448 - -
Stsc175g00007 448 MobiDBLite consensus disorder prediction 280 311 - -
Stsc175g00007 448 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Stsc175g00007 448 PANTHER BNAC03G44070D PROTEIN 1 368 - -
Stsc175g00007 448 Pfam DnaJ domain 68 128 IPR001623 -
Stsc175g00007 448 SUPERFAMILY Chaperone J-domain 58 131 IPR036869 -
Stsc175g00007 448 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Stsc175g00007 448 MobiDBLite consensus disorder prediction 416 448 - -
Stsc175g00007 448 MobiDBLite consensus disorder prediction 385 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc175g00007 Stsc-Chr175 21150 22496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc175g00007 2 225 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 26.957 1.20e-17 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc175g00007 - - aip:107619213 634.795