Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc175g00005 ATGAATTATGTGCCATTTCTAGAGAAGTGCAGACACATAGGACATGCATCAAGAAATAATGATGATGAAGAGAACAACCTAATAACTATTGGTGATGATAATTCATCATCGTCTACCCCAAGATCCTCCACTTTCTTCAGAACCTGTCTCAATGGACTCAACGCACTATCAGGAGTGGGTATACTGTCAATTCCATATGCCCTTGCATCAGGAGGATGGCTAAGCATAATTCTTCTCTTTGCTATCGCCATGGCAGCATTTTACTCCGGAATCTTGATGAAGCGCTGCATGGACTCCAACCATAACATCAAAACCTACCCGGAAATAGGCCACCTTGCTTTCGGAAACCTCGGAAGAACCGCCGTATCCCTCTCCATGTACACCGAGCTCTACCTGGTGGCCACCGGATTCTTGATTCTTGAAGGTGACAACTTGGATAACTTGTTCCCAAACACAGAGATGAGTTCAATTATTGGCGGGAAGAAGCTCTTTGTGGTGGTTGTTGGGATTATTATCATGCCAACTGTTTGGCTTGACGACTTGAGTCTTCTTTCTTATGTGTCTGGGAGTGGGGTTATTGCTTCAGGTGTAATCGTAGGTGCAGTTTTCTTTACTGGAGCCATTGATGAATCAGTTGGATTCAGAGAAAAGGGAAGGGTTGTTGATTTGGGTGGGGTCCCTACGGCGGTTAGCTTGTATGCGTTTTGTTACTGTGCGCATCCGGTGTTTCCTAGCTTGTACAATTCCATCAAGGACAAGCAACAGTTCTCCAAGGTTCTACTTGTATGCTTTGTGTTAAGCACAGCAGCATACGCATTCATGGCAATCATAGGTTACCTAATGTTTGGCTCCAAAGTGGAATCACAAATAACACTAAACCTTCCCAAGAACAAAATAACCTCTCAAATAGCAATATACACTACATTGGTGAACCCCATAGCCAAATACGCTTTGATGGTTACACCAATCACCAATGCATTAAAATCCTTGCTTCCACACCAACACATGAACAACAGATTCATTAGCATCTCAATAAGCACTGCATTGGTGTTCAGCACCGTCGCCGCCGCCGTGGCGGTTCCATTCTTTGGCTCGCTTACTTCTCTCGTCGGAGCGTTCTTGAGCGTAACGGCTTCAATTATAATGCCATGTGCTTGCTACTTGAAGATTTCGGGTACTTATAAGGAACTTGGTTTTGAGACCATTGCTATAGTCACCATAATATTCATTGGTGTGGTTATCGGAGTTTTTGGCACGTATAATGCATTGGCAGAAATAATCAATCAACTTTAG 1293 0.4362 MNYVPFLEKCRHIGHASRNNDDEENNLITIGDDNSSSSTPRSSTFFRTCLNGLNALSGVGILSIPYALASGGWLSIILLFAIAMAAFYSGILMKRCMDSNHNIKTYPEIGHLAFGNLGRTAVSLSMYTELYLVATGFLILEGDNLDNLFPNTEMSSIIGGKKLFVVVVGIIIMPTVWLDDLSLLSYVSGSGVIASGVIVGAVFFTGAIDESVGFREKGRVVDLGGVPTAVSLYAFCYCAHPVFPSLYNSIKDKQQFSKVLLVCFVLSTAAYAFMAIIGYLMFGSKVESQITLNLPKNKITSQIAIYTTLVNPIAKYALMVTPITNALKSLLPHQHMNNRFISISISTALVFSTVAAAVAVPFFGSLTSLVGAFLSVTASIIMPCACYLKISGTYKELGFETIAIVTIIFIGVVIGVFGTYNALAEIINQL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc175g00005 430 Pfam Transmembrane amino acid transporter protein 42 422 IPR013057 -
Stsc175g00005 430 PANTHER AMINO ACID TRANSPORTER 34 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc175g00005 Stsc-Chr175 15903 18763 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc175g00005 23 430 Amino Acid or Auxin Permease AAAP Family AT3G28960 54.015 2.73e-154 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc175g00005 K15015 - gmx:100794374 500.36