Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1745g00001 ATGCATCATCATCCGCCCTTAGATCTATTAACTACAACAACATCTTCAAAGGATCATCATCATCTTGGTCAGCTTGATCATGATCATCATCTTGGTCAGCTTGATCATGATCATCACATGCAGCAGTCCACTACTAGAGTTCCATCACAACACTTCAACAACAATAATAATAATAATGGCGTGGTAGAAACAAAAAGATCAAGCACTTTGATGCAGTCATCAAATGCATCGAAGAAATCAAGACCCGAATCATCACGATCTTCATGCCAACACCTTAAGACAGATACAGCATCGGTACTTCTGGAGGCAATTGGATACATTAGATTCCTTCAAAGCCAAGTGGAGACACTGAGTGTTCCATATATGAAGTCATCGCGGAACCAAATCAGTAGAGGATTCATAATGAGGCAAGGGGTTTCAGCAAGAGATGATAATAGCATGAACTCGGAGGCAAAGCATGATCAAAACCTAAGAAGCCGAGGCCTCTGCCTTGTACCAATGTCTTGCATGCCATACATAGCCGGCGACGACGATGGTGGCGGTTGGGGAGCGAGGCAGCAACCGCCAAATTTTGGCAGCGCAACCTAA 588 0.4405 MHHHPPLDLLTTTTSSKDHHHLGQLDHDHHLGQLDHDHHMQQSTTRVPSQHFNNNNNNNGVVETKRSSTLMQSSNASKKSRPESSRSSCQHLKTDTASVLLEAIGYIRFLQSQVETLSVPYMKSSRNQISRGFIMRQGVSARDDNSMNSEAKHDQNLRSRGLCLVPMSCMPYIAGDDDGGGWGARQQPPNFGSAT 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1745g00001 195 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 93 171 - -
Stsc1745g00001 195 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 75 124 IPR036638 GO:0046983
Stsc1745g00001 195 MobiDBLite consensus disorder prediction 43 91 - -
Stsc1745g00001 195 CDD bHLH_AtbHLH_like 93 118 IPR045239 -
Stsc1745g00001 195 MobiDBLite consensus disorder prediction 37 91 - -
Stsc1745g00001 195 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1745g00001 Stsc-Chr1745 1462 5498 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1745g00001 34 172 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 44.311 5.01e-27 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1745g00001 - - aip:107647881 222.246