Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc173g00010 ATGGTGAACTGGTTGAACGTGTGGATAGTGGTGGCGCTGTTGGTACCGGTGCTTCTCTCCCTCAGGAACCCTCGCCGCGAATCCCAAACCAAAATCCAAACCCTCCCCAAACCTCATTCTCACAAACAGACCCAAACTCAAACCCTTCACCTTCCATCTTCTCCTTCTTCTTCTCCTTCTTCCAATTCGTTCTTCAATGAGAGAATCAGGGATGGCTCCAACTTGGACTACGATTTCTACAGGGACACCTGTCCTCAGGCCGAGGACACTATCCGCTCCGCCGTCACTCGCATCTTCTTCGACCGCAGGGATTCCGCCCCCGCCATCCTCCGCCTATTCTTCCATGATTGCTTCATTCAGGGCTGCGATGCTTCGGTGCTATTGGATGATAGCAATGGCGATAAAAACCGTTCCATTGAGAAGCAGGCTGTTCCGAATCAAACCTTGAGAGGTTTCGACAAAATCGACTTGATCAAGGAGGAGCTGGAACAAGCCTGTCCTGGAGTTGTCTCTTGTGCTGACATACTTGCCATCGCGGCTAGAGATTTTGTTACTTTGGCTGGCGGGCCATTCTATCCGGTTCTAACAGGAAGGAGGGATAGCAATCAATCATTTTATGAGGAAGCAAATGATCAGATTCCCAGACCTGACGATAATGTTACTCGCACGCTGCGGCTGTTCAGTCTCCGAGGATTTAATGAAAGAGAAACTGTCAGCCTTCTTGGGGGGCACAACATAGGAAAGATCGGCTGTGAATTCATTCAGGAAAGACTCTACAACTTCCAAGGCACTGGCCAAGCAGACCCCACTATACCTGTCGATTTCCTCAATCAGATGAAGCTAAACTGCCCAGAAAACGACACTATCCTTGAGGCTTCAACGTTTGAAGTTTCAAAGCTGGAAAGTAGTCATTCGGACATACGGACGTCATACTTGCAAGCATTGTCATCTGCAATACCGTCCGGAGCAGCATTCGACACTCACTATTACCAAAGCTTGTTGAAGGGAAGGGGACTACTCTTTGCCGACCAGCAGTTGATGTCTCATGCAAAGACTGCAAGATTGGTCTCTGCTTATGCTTCAGATGACGGTTCAACCTTCCGCACGGATTTTGCCAGGGTTATGTTGAAATTGTCTAATCTTGATGTTCTAACTGGACTTCAGGGTCAGGTTCGCCTTAATTGCTCGCAACCTGTAAGTTCTTAA 1206 0.4842 MVNWLNVWIVVALLVPVLLSLRNPRRESQTKIQTLPKPHSHKQTQTQTLHLPSSPSSSPSSNSFFNERIRDGSNLDYDFYRDTCPQAEDTIRSAVTRIFFDRRDSAPAILRLFFHDCFIQGCDASVLLDDSNGDKNRSIEKQAVPNQTLRGFDKIDLIKEELEQACPGVVSCADILAIAARDFVTLAGGPFYPVLTGRRDSNQSFYEEANDQIPRPDDNVTRTLRLFSLRGFNERETVSLLGGHNIGKIGCEFIQERLYNFQGTGQADPTIPVDFLNQMKLNCPENDTILEASTFEVSKLESSHSDIRTSYLQALSSAIPSGAAFDTHYYQSLLKGRGLLFADQQLMSHAKTARLVSAYASDDGSTFRTDFARVMLKLSNLDVLTGLQGQVRLNCSQPVSS 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc173g00010 401 FunFam Peroxidase 78 223 - -
Stsc173g00010 401 PRINTS Haem peroxidase superfamily signature 170 187 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc173g00010 401 PRINTS Haem peroxidase superfamily signature 188 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc173g00010 401 PRINTS Haem peroxidase superfamily signature 318 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc173g00010 401 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc173g00010 401 PRINTS Haem peroxidase superfamily signature 106 120 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc173g00010 401 Pfam Peroxidase 92 362 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc173g00010 401 ProSitePatterns Peroxidases active site signature. 106 117 IPR019794 GO:0004601
Stsc173g00010 401 MobiDBLite consensus disorder prediction 29 65 - -
Stsc173g00010 401 Gene3D Peroxidase, domain 2 214 379 - -
Stsc173g00010 401 PANTHER PEROXIDASE 25-RELATED 49 386 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc173g00010 401 Gene3D - 79 396 - -
Stsc173g00010 401 SUPERFAMILY Heme-dependent peroxidases 75 397 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc173g00010 401 PRINTS Plant peroxidase signature 235 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc173g00010 401 PRINTS Plant peroxidase signature 169 179 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc173g00010 401 PRINTS Plant peroxidase signature 150 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc173g00010 401 PRINTS Plant peroxidase signature 373 386 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc173g00010 401 PRINTS Plant peroxidase signature 84 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc173g00010 401 PRINTS Plant peroxidase signature 332 349 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc173g00010 401 PRINTS Plant peroxidase signature 188 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc173g00010 401 PRINTS Plant peroxidase signature 108 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc173g00010 401 PRINTS Plant peroxidase signature 316 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc173g00010 401 ProSiteProfiles Plant heme peroxidase family profile. 74 399 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc173g00010 401 CDD secretory_peroxidase 74 396 IPR033905 GO:0004601|GO:0042744
Stsc173g00010 401 FunFam Peroxidase 214 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc173g00010 Stsc-Chr173 76658 79343 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc173g00010 71 397 Peroxidase AT4G33870 46.765 6.27e-96 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc173g00010 K00430 - gmx:100804973 570.081