Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc173g00001 ATGAAAAACGTCAATGCCAACAAGGAAAATAGTGGTTCTCGTCAATCTCAAAGACGATACACTAGATTTGAAGTTATTGGTGCCTATATATGGCGATGTGCTTCTAAAGCTCGTCGTGAACTTAAAGAAAATCAACCTACTGTTGTTAAATTCAATGTTAATATTCGAAACAGGCTTAATCCTCCTCTGCCTCAGATATTTTGGGAATGCCTTGGCTCCAACAGTTACCCCGACGAGCTGCGTCGGAGAAATCATATCTCGTCCGTTGAGTTACACGACGCAGAAGATAAGGGAAGCAGTAATGAATACATAAGATCACAGATGGATTTTGTAGCAAAGCAAGAGAGATGGGATTTGATTAGGACACCTTATTTGGAGAGAGGAGAGTATAAGGTAGATGTGCCTTTCTTTGGGAACCCCAACATTATATTTGTAAGTTGGATGAGTCTGCCAGCATATGAAGCTGATTTTGGGTGGGGAAAGCCCTTTTATTTTGGTCCAGGTGGTGTGTGCCCTTATGAGAGGGCCGTTATTTTTAAAAGACCACAGGAGGATAATCATGGCGATGAGGAGGTTGTTGTGTTCATGCATTTCCAGGAGGCATATATGCAAGATTTCATCAAGTTTTTCTGGGAAGATATAAGAGATTCTAGTTGCAGCACACAAGCCAAGCTTTGA 678 0.4145 MKNVNANKENSGSRQSQRRYTRFEVIGAYIWRCASKARRELKENQPTVVKFNVNIRNRLNPPLPQIFWECLGSNSYPDELRRRNHISSVELHDAEDKGSSNEYIRSQMDFVAKQERWDLIRTPYLERGEYKVDVPFFGNPNIIFVSWMSLPAYEADFGWGKPFYFGPGGVCPYERAVIFKRPQEDNHGDEEVVVFMHFQEAYMQDFIKFFWEDIRDSSCSTQAKL 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc173g00001 225 Pfam Transferase family 8 207 - -
Stsc173g00001 225 PANTHER F21J9.9 13 206 - -
Stsc173g00001 225 Gene3D - 1 213 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc173g00001 Stsc-Chr173 5959 7224 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc173g00001 6 212 Monolignol Biosynthesis Gene Families AT5G48930 30.660 3.19e-23 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc173g00001 K13065 - aip:107646786 215.698