Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc172g00003 ATGCAGCATCAGAGTTTCATTGCAGGCAAAGTCGTAGTTGACGTGGGATGTGGTACAGGAATCCTTGCAATATTTTGTGCTCAGGCTGGCGCAAAACGAGTATATGCAGTTGATGCCAGTGACATTGCCTTGCAGGCAAATGAAGTTGTGAAAGCAAATAACCTGTCTGATGTTATTGTTGTATTGCATGGACGGGTTGAGGATGTTGAAATCGATGAAGAGGTGGATGTTATTATTTCAGAATGGATGGGTTATATGCTTCTATATGAGAGCATGCTTGGAAGTGTTATTACTGCTAGAGATCGCTGGCTCAAACCCGGGGGTCTTATCCTTCCTTCAAATGCAACGTTGTACATGGCTCCTGTCACACATTCTGATAGATACAGTGAAAGCGTTGACTTCTGGCGCAATGTCTACGGAATTGATATGTCTGCCATGTTATCATTAGCAAAACAGTGTGCATTTGAAGAGCCTTCTGTGGAGACAATTACTGGTGAAAATATTTTGACATGGCCACATGTGGTGAAATATATTGATTGTTATTCTGTTACCATCCCTGAGCTAGAAACTGTAACAACAGGATTTAAGTTCAATTCAATGATGCGAGCACCACTGCATGGTTTTGCATTTTGGTTCGATGTTGAATTTAATGGGCCAGCAATACCAACAAGCGATTATCATTCATCAACTTCATTTACAGAAAATCATCTTGTGAATGGTAGTCAGAGGAAAAAGCGGACAAATCCAAGTGAAGCATTGGTCCTGTCCACTGCACCTGAGGACCCTCCAACGCATTGGCAGCAGACGTTGATATACTTTTATGATCCGATAGAATTGGAACAAGATCAAGCAATTGAAGGTCTAGTGACATTGACACAAAGTAAAGAGAATGCTCGCTTTATGAATATTCACCTTGAGTATACTTCGGGAGGGCGATCACATGTCAAAGAGTCTGTAATGAGATGA 966 0.4151 MQHQSFIAGKVVVDVGCGTGILAIFCAQAGAKRVYAVDASDIALQANEVVKANNLSDVIVVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKPGGLILPSNATLYMAPVTHSDRYSESVDFWRNVYGIDMSAMLSLAKQCAFEEPSVETITGENILTWPHVVKYIDCYSVTIPELETVTTGFKFNSMMRAPLHGFAFWFDVEFNGPAIPTSDYHSSTSFTENHLVNGSQRKKRTNPSEALVLSTAPEDPPTHWQQTLIYFYDPIELEQDQAIEGLVTLTQSKENARFMNIHLEYTSGGRSHVKESVMR 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc172g00003 321 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 1 321 IPR025799 GO:0016274|GO:0018216
Stsc172g00003 321 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 6 311 IPR029063 -
Stsc172g00003 321 FunFam Protein arginine N-methyltransferase 6 114 319 - -
Stsc172g00003 321 CDD AdoMet_MTases 12 111 - -
Stsc172g00003 321 Gene3D - 114 320 - -
Stsc172g00003 321 Coils Coil 320 321 - -
Stsc172g00003 321 Gene3D Vaccinia Virus protein VP39 1 112 IPR029063 -
Stsc172g00003 321 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 2 309 IPR025799 GO:0016274|GO:0018216
Stsc172g00003 321 Pfam Ribosomal protein L11 methyltransferase (PrmA) 8 82 - -
Stsc172g00003 321 FunFam Protein arginine N-methyltransferase 6 1 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc172g00003 Stsc-Chr172 20782 32209 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc172g00003 1 321 C2H2 Transcription Factor Family AT3G12270 34.524 4.30e-52 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc172g00003 K11437 - gmx:100809171 589.726