Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc171g00011 ATGGATCATAGAAGGGGTTGTTACAAGGAATTGTTGCCACTTGTGGTGCTTGTGGCGAATGAATGCAGCAACACAGGGTTGTTCACTCTCTTCAAAGCAGCCAGCAATGGAGGATTGAGCAACTATGTCTTTGTTGCTTATGCTTATTCTGTTGCAACCATTCTACTCTTTCCTCTCACTTTCTTCTATAGAAGATCAAGAGTGGTTCCTCCACTAAGTTTATCAATCATATCCAAGATTGCCCTGCTTGGGCTCATAGGATGTTCATCACAGATTCTGGGGTATGCTGGAATTAGTTACAGTAACCCCACACTTTCCTCTGCTATCAGTAACCTCATTCCTGCTTTCACCTTCATACTTGCCGTCCTTTGCAGGATGGAAAAGATAGATGTAAGAACTAGAACAACCCAAGCAAAAATTGTGGGAAGCATAATATCAATAGGAGGTGCATTTATAGTGACATTCTACAAAGGACCATCCATCATTATTGCTGATGATTCCCCTTCTCTCCTTCTTGTTCAACGATTAAATTATAATGATGGAAACCTTCAATCAGTGGATAGAAATTGGGTCATTGGTGCCTTTCTTCTTACCGCTGGCAATGTCCTTCTCACAACATGGTTCATTGTACAGGTGGAAATCTTGAAGGAGTTTCCAGATGAACTATCTATGGTCTGCTTTTATGACTTCTTTGCTGCCATTGTAGCATATGGTTTTGGCTTAATATTAGAGAGAAATTCAAGTGCTTGGAAACTAACATCAAATTTATCATTGGTCTCCATAGTTTGCACTGGAATATTTAATAAGTTCTTGAGCAGTGCAATATATGCATGGGGAATACACTTAAAGGGTCCTGTATATGTAGCAATGTTCAAGCCACTCTCAATTGTTATTGCTGTTGCCATGGGTGTCATGTTCCTTGGGGATATCCTTCATGTTGGAAGCATAATTGGAGCTACAGTAATCTCAATTGGATTTTACACTGTAATGTGGGGCAAAGCAACAGAGGAGAAGGAGGAAGATGTTGTTAATAGCCAGGATTCACCAACTACTATTGATCATCAGCATGCTCCTCTCTTGGAGAGCTGTAAAAATGTAAATTCTCATAAGAATGTAGATGTAAATGTATAG 1131 0.3979 MDHRRGCYKELLPLVVLVANECSNTGLFTLFKAASNGGLSNYVFVAYAYSVATILLFPLTFFYRRSRVVPPLSLSIISKIALLGLIGCSSQILGYAGISYSNPTLSSAISNLIPAFTFILAVLCRMEKIDVRTRTTQAKIVGSIISIGGAFIVTFYKGPSIIIADDSPSLLLVQRLNYNDGNLQSVDRNWVIGAFLLTAGNVLLTTWFIVQVEILKEFPDELSMVCFYDFFAAIVAYGFGLILERNSSAWKLTSNLSLVSIVCTGIFNKFLSSAIYAWGIHLKGPVYVAMFKPLSIVIAVAMGVMFLGDILHVGSIIGATVISIGFYTVMWGKATEEKEEDVVNSQDSPTTIDHQHAPLLESCKNVNSHKNVDVNV 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc171g00011 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 156 - -
Stsc171g00011 376 PANTHER WAT1-RELATED PROTEIN 13 343 IPR030184 GO:0016020|GO:0022857
Stsc171g00011 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 334 - -
Stsc171g00011 376 Pfam EamA-like transporter family 29 154 IPR000620 GO:0016020
Stsc171g00011 376 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc171g00011 Stsc-Chr171 64642 67836 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc171g00011 4 365 Nodulin-like Gene Family AT3G28050 49.067 5.70e-117 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc171g00011 - - adu:107490809 561.607