Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc171g00010 ATGAAGGAGTACCCTGATGAATTATCTGTGGTCTTCTTTTACAATGTCACTGCTACTATTGTCTCATTCACTGTAGCTTTATTCACAGAGCCAAGAGCAAGTGCTTGGAAAATAGGACTTGACATATCATTGGTTTCTATTGTTTGCTCTGGAATATTTGGAAAGTTCATGAGCAATGCAGTTTTTACATGGGTACTGCACTTAAAAGGAGCTGTCTATGTTGCAACATTCAGGCCACTCTCAATTGTTATCGCCATTGTTATGGGAGTTGTGTTCCTTGGTGATACTCTTCACATTGGAAGTATAATTGGAGCTACAATAATATCAATTGGCTTTTATACTGTATTGTGGGGCAAAGCAACAGAAGAGACAGAAGAAGAAGAAGATTTTGGTAACCAGGAATCAGAAACTAGTGAGAATGTTCCTCTTTTGCATAGCTATAAAACTGCAAATGAAAATGTACATAATACAAGTACAAGCTCGTCACAGTTAATATAA 498 0.3695 MKEYPDELSVVFFYNVTATIVSFTVALFTEPRASAWKIGLDISLVSIVCSGIFGKFMSNAVFTWVLHLKGAVYVATFRPLSIVIAIVMGVVFLGDTLHIGSIIGATIISIGFYTVLWGKATEETEEEEDFGNQESETSENVPLLHSYKTANENVHNTSTSSSQLI 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc171g00010 165 Pfam EamA-like transporter family 8 116 IPR000620 GO:0016020
Stsc171g00010 165 PANTHER WAT1-RELATED PROTEIN 1 129 IPR030184 GO:0016020|GO:0022857
Stsc171g00010 165 SUPERFAMILY Multidrug resistance efflux transporter EmrE 18 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc171g00010 Stsc-Chr171 62321 63680 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc171g00010 1 148 Nodulin-like Gene Family AT3G28050 50.314 1.43e-47 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc171g00010 - - gmx:100814137 201.445