Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc171g00008 ATGGGATCATGTCCACAAGAAGAAGAAGATGGTGGTTTTCGCCTTATCAACTCTCTTCAAAGCAGCTACTCACAGAGGCATGAGCCACCATGTCTTTCTTCAAAAGATCATCATCAGTGGCTCCTCCAATCACTTTTTCCATACTCATCAAGATCGTCCTTCTTGGGGATGGAAAAGGTAGCTGCAAAGAGTAGAAGTAGCCAAGCCAAGATAATAGGAAGCATTGTATCAATAGCAGGGGCATTTGTAGTGACATTCTACAAAGGTCCTTCTATCAACATTGCTCAAAGTCGCCTACCTTTACCAACAGAACAACATATTATTAGCTTTCCAAATTCAGTAGATACAACTTGGGTAATTGCTGGAACACTTCTCACAGCTGATTACTTACTGGTTTCACTATGTTACATTTGGCAGGCAGAAATCTTGAAGGCTGATGAGTTAACTGTGGTCTTCTTTTACAATGTCACTGCAACTATTGTGTCAGTGACTGTAGCTTTATTCACAGAGCGAAATGCGAGTGCTTGGGAAATAGGACTTGACATATCATTGGTTTCTATTATTTGCTCTGGAATATTTGGAAAGCTCATGAGCAATGCTGTTAATGCCTGGGCACTGCGCTTAAAAGGAGCTGTCTATGTAGCTACATTCCAGCCACTCTCAATTGTTATTGCTACTGCCATGGGAGTTGTGTTCCTTGGTGATGCTCTGTACATTGGAAGTATAATTGGAGCTGCAATCATATCAATTGGCTTTTATACTGTATTGTGGGGCAAAGCAACAGAAGAGAAAGAAGAAGAAGATGATGATGATTTTGGTAACCAGGAATCACTAACTATTGAGAATGTTCCCCTTTTGCAAAGCTATAAAACTGTGAATGAAAATGTACATAATACAAGTACAAACTAG 909 0.4004 MGSCPQEEEDGGFRLINSLQSSYSQRHEPPCLSSKDHHQWLLQSLFPYSSRSSFLGMEKVAAKSRSSQAKIIGSIVSIAGAFVVTFYKGPSINIAQSRLPLPTEQHIISFPNSVDTTWVIAGTLLTADYLLVSLCYIWQAEILKADELTVVFFYNVTATIVSVTVALFTERNASAWEIGLDISLVSIICSGIFGKLMSNAVNAWALRLKGAVYVATFQPLSIVIATAMGVVFLGDALYIGSIIGAAIISIGFYTVLWGKATEEKEEEDDDDFGNQESLTIENVPLLQSYKTVNENVHNTSTN 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc171g00008 302 PANTHER WAT1-RELATED PROTEIN 55 267 IPR030184 GO:0016020|GO:0022857
Stsc171g00008 302 SUPERFAMILY Multidrug resistance efflux transporter EmrE 156 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc171g00008 Stsc-Chr171 57095 59873 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc171g00008 57 290 Nodulin-like Gene Family AT3G28050 46.122 5.11e-64 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc171g00008 - - gmx:100790743 294.664