Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1704g00002 ATGAAGAAGATCTCATCAAACTCTTCTCATTCTTCATCATCAGCACCATCATCATCTACCTCAAGATTTGACCCACCTTCAGCTATGTGCAACAACTCCAAAAATGGATCTTCAGGGTGCTTCAACGCAATCCTCCGCAGGATTCTCTGTTCTGGTGGCCTCCCAACACACCCATCTGATCAAATTAGAGAATTCGATCCAAATCCAATTCTGGGTAGTGCCAAAGATCAAAACTTTAATCCCAAAAAGCACCATGCTAAAGCCACTACTAGTAGTAGTGTTAGTTCTTCTGTTACTACTACAACAACTACTACTACTACGACTCCAGGGATAGTTGCAAGGTTGATGGGTTTGGATTCAATGGTGGAGATGCCTTCGAATTCATCGCTTTCGCGAAGCAAATCGATGAATTCGGTGGATTGCTTAGGGGAGGGTAATAGAATGGATGGTTTGCATAAGAGGGTAAAATCGACATTGTCATTTAGGGAGCTTCCAACTTTCCTCTTACTTGAGAATGAAAACTTCTTTGTGCTTAGCTTTGAGAATAAGAAGAAGAATCATAATAATGGTGAAGAGTTGAAGGAAAAGAAGAGAGAAAATGTGAAGAGTAGTAGCAAAAGAGTTGCTGATGCAAATCTTCAAGAGATTACCAACACTTGTTATTATGAGAGGAACAAGAAGAACAAGAAGAAGAAGAACATGTGTTTTGATTCTGAAGCAAGGAAACTGTCACAGCCAAGGATCCTTAAGGATGATGCTGTTGTTGTTGGTGGTGGTGATGAGAGGATGAAGAGGAGAAGGAGGAGGAAGAGGAACAATAATAATTCAAATTGTTTCACAGAGAAGAAAAAGAGTCAAGTTGAATCCAATAAGCCATCATCAGAAGATACAAGTCCTGTTTCTGTTCTTGATTTTGAGAAGAGGGAAGCTTGTGAACCAGCCAATTTGAATTCAAGAAGGAAATTGTCACCAGAGCTTGAGAATGATCAGAAAATCCTTGTGCGTTCTGATGGAGATTTGATGGATGAAGAGGGGAAAACCAACAAATTATGTGAAGAAGGATCAAAGAAAAAAGAGAAGAATGTGAAAATTTGGGATGAAATTTGCAAGCTAGCTAAGGAGGATGAAGTAGCATGGATGAATAATAATAAGAAACAAGTTGGTGATTTATTAGGAAGCATTAGTGCTGATTTTGCTTCTCATATTTTTGATCAATTGTTAAATGAAGTAGTGATTGATCAACTTCTTGTTGAGGATCCATAA 1263 0.3864 MKKISSNSSHSSSSAPSSSTSRFDPPSAMCNNSKNGSSGCFNAILRRILCSGGLPTHPSDQIREFDPNPILGSAKDQNFNPKKHHAKATTSSSVSSSVTTTTTTTTTTPGIVARLMGLDSMVEMPSNSSLSRSKSMNSVDCLGEGNRMDGLHKRVKSTLSFRELPTFLLLENENFFVLSFENKKKNHNNGEELKEKKRENVKSSSKRVADANLQEITNTCYYERNKKNKKKKNMCFDSEARKLSQPRILKDDAVVVGGGDERMKRRRRRKRNNNNSNCFTEKKKSQVESNKPSSEDTSPVSVLDFEKREACEPANLNSRRKLSPELENDQKILVRSDGDLMDEEGKTNKLCEEGSKKKEKNVKIWDEICKLAKEDEVAWMNNNKKQVGDLLGSISADFASHIFDQLLNEVVIDQLLVEDP 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1704g00002 420 MobiDBLite consensus disorder prediction 60 110 - -
Stsc1704g00002 420 MobiDBLite consensus disorder prediction 257 302 - -
Stsc1704g00002 420 MobiDBLite consensus disorder prediction 188 209 - -
Stsc1704g00002 420 PANTHER OS05G0128300 PROTEIN 22 412 - -
Stsc1704g00002 420 MobiDBLite consensus disorder prediction 188 205 - -
Stsc1704g00002 420 MobiDBLite consensus disorder prediction 84 110 - -
Stsc1704g00002 420 Pfam DUF761-associated sequence motif 96 128 IPR032795 -
Stsc1704g00002 420 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1704g00002 Stsc-Chr1704 8872 10251 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1704g00002 33 411 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 29.040 3.18e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1704g00002 - - ahf:112792310 513.457