Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc16g00026 ATGGATGGCATTAAGCAATTGCTTGCTTCTGAGTCTTCCTCTGCATTAGAATCGAGTATCCAGATTTTGGATGACGAGGACGACCAGGATTATATTCCAAGGGCTGGGATGACTTTTAATACACTTGAAGATGCTTCTACTTTTTACAAAGAGTATGCTAAACGTGTTGGATTTTCTACTAAGATAAGGAACATTAATAGGTGCAAGGAGACCAAGGAAATAAAGAACCAACTCATCACATGTAATAGGGAGGGGAAATGGATTTCTGAGATACCGTGTGTGGAGAAGATGAATCCTACATGTGGTGCGAACTATCCTGCAAGGATTGCACATAGTGAAGAAAACGTTACGCTAGTGCATTTCGAAGGTGGTTCTTCATTACTCACATCCGTGTTGCCCCGATCAATCCCAAATGTTGCCTCAGCATAG 429 0.4172 MDGIKQLLASESSSALESSIQILDDEDDQDYIPRAGMTFNTLEDASTFYKEYAKRVGFSTKIRNINRCKETKEIKNQLITCNREGKWISEIPCVEKMNPTCGANYPARIAHSEENVTLVHFEGGSSLLTSVLPRSIPNVASA 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc16g00026 142 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 23 109 - -
Stsc16g00026 142 Pfam FAR1 DNA-binding domain 47 86 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc16g00026 Stsc-Chr16 197369 198230 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc16g00026 FAR1 2.5e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc16g00026 - K17604 adu:110280446 104.375