Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc169017g00001 ATGGCTGCAAGGAACCAACCATTTGAGGTTGTGTATTCTCCAAGGGCAAACACTCCTGAGTTCTGCATTAAGGCTTCTTCTGTGAGTTCTGCAATGAGGATCCAATGGTGTCCTGGCATGAGGTTCAAGATGCCCTTTGAGACTGAGGATTCTTCTAGAATCAGCTGGTTCATGGG 176 0.4716 MAARNQPFEVVYSPRANTPEFCIKASSVSSAMRIQWCPGMRFKMPFETEDSSRISWFMG 59
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc169017g00001 59 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 2 59 IPR044835 GO:0003677|GO:0006355|GO:0009725
Stsc169017g00001 59 Pfam Auxin response factor 2 59 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Stsc169017g00001 59 Gene3D - 35 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc169017g00001 Stsc-Chr169017 1 217 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc169017g00001 6 59 B3 DNA Binding Superfamily AT2G28350 81.481 1.14e-26 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc169017g00001 - - sind:105170291 114.775