Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1687g00001 ATGCAAGAAACCATGGATATGCCAAATATGACTGATAATGGCACCAACATGGACATGAATATGCAGATGAGCTTCTATTGGGGGAAACATGGCACAGTGCTTTTCTCTGGCTGGCCAAACCACAGTGCTGGCATGTACACATTGGCACTCTTCTTTGTCTTCTTCTTATCATTGGGCATTGAGATTCTCTCCAACCAGCCGCCGATTCGCCATGGGGCTAAACCAGCTCTCGGAGTGGTGGTTCAGGCCTCCGTGTACTTCTTCCGGATCAGCTTCCTCTACTTGGTCATGCTTGCTGTCATGTCCTTTAATGGAGGAATCTTCATAGCTGCTGTTCTTGGTCACTCCTTGGGATTCTTCTTAGCCAAGTTTCGAGCTATTTCCATGGCCAACAGGGAATCCTCTGGTCTTGAGCAAAAGGTTTGA 426 0.4765 MQETMDMPNMTDNGTNMDMNMQMSFYWGKHGTVLFSGWPNHSAGMYTLALFFVFFLSLGIEILSNQPPIRHGAKPALGVVVQASVYFFRISFLYLVMLAVMSFNGGIFIAAVLGHSLGFFLAKFRAISMANRESSGLEQKV 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1687g00001 141 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 14 133 IPR007274 GO:0005375|GO:0016020|GO:0035434
Stsc1687g00001 141 Pfam Ctr copper transporter family 75 121 IPR007274 GO:0005375|GO:0016020|GO:0035434
Stsc1687g00001 141 Pfam Ctr copper transporter family 23 64 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1687g00001 Stsc-Chr1687 585 1215 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1687g00001 24 121 Inorganic Solute Cotransporters AT5G59030 50.980 1.16e-27 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1687g00001 K14686 - gmx:100527849 164.466