Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1685g00001 ATGGCAGTAGTAACGACTTTAGCTTTCTTCTACACCTTCTTCCATTATCTACACCTCTCTCTTTCACCCTCTTCAAGCTCTCTGTCTACCTCGTGCTCTCCTCCTCGACTAACACAGCGCCGACAGCAGCAAGAAGAATCGGCAACGATAGTAGCAACATCAAGCTCTAACAATAGCAGCGGCGACGTCAACGACCCTATACTCCTTTGTCACTGTTCATGTCTTCTTTTTCTCTCATATTGTCCATCGATGACGGTTGTAATAGCCCAATCCTCCCCTGACTTCGCCTTCTTCTTCTCCATCGGTGGATCTCCTCCTCTCTCACTCTCATGGAGCCCCTCTCTCTCTAGCTCTCCCTCTTCGACCCCTCTCTCTTTCCTCCCCTCTGGTTGTGGTAAGATGGAAGCTGCTAGTTTAGATCCATCAATAGAAGTGGATTCAGATCGTTCACATGAATCAGAGAATACAGAGCAGTTTTCATGCGATGTTGATGATCAGTATGTTCCAAAGGTTGGGATGCTTTTTGGATTACTCGAGGAAGCTAGGGATTTTTATCGGGATTATGCTAAATGCGCCGAGTTCGCTACAAAAATAAGGAACACAAATAAGAGTAAGAAATCAAACGAAATTCTGAACCAGCTACTTTCCTGTAATAGAGAGGGGAAAAGGAGGTTCGACGTACCTGTTTCAGAGAGGACAAAGGCTATATATCCTTCTAATTGCCCGGCCGGAATTCCACCAAGCAAGAGTTATCAATTGCTTGTTATGGCAGCCGGCGGACAAGACAAATTGAATTTCATAGAAAAGGATGTAAGGAACTTGATGACAAGAGAGATTCACAACATTTCGGAAGAGGACTGA 861 0.4495 MAVVTTLAFFYTFFHYLHLSLSPSSSSLSTSCSPPRLTQRRQQQEESATIVATSSSNNSSGDVNDPILLCHCSCLLFLSYCPSMTVVIAQSSPDFAFFFSIGGSPPLSLSWSPSLSSSPSSTPLSFLPSGCGKMEAASLDPSIEVDSDRSHESENTEQFSCDVDDQYVPKVGMLFGLLEEARDFYRDYAKCAEFATKIRNTNKSKKSNEILNQLLSCNREGKRRFDVPVSERTKAIYPSNCPAGIPPSKSYQLLVMAAGGQDKLNFIEKDVRNLMTREIHNISEED 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1685g00001 286 MobiDBLite consensus disorder prediction 25 60 - -
Stsc1685g00001 286 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 144 245 - -
Stsc1685g00001 286 Pfam FAR1 DNA-binding domain 183 245 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1685g00001 Stsc-Chr1685 8367 10901 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc1685g00001 FAR1 7.7e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1685g00001 - K17604 aip:107612320 107.457